Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.36■□□□□ 0.21
SNCGO76070 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
SNCGO76070 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC16.36■□□□□ 0.21
SNCGO76070 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC16.36■□□□□ 0.21
SNCGO76070 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SNCGO76070 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNCGO76070 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNCGO76070 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNCGO76070 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNCGO76070 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNCGO76070 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC16.35■□□□□ 0.21
SNCGO76070 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNCGO76070 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNCGO76070 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNCGO76070 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SNCGO76070 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SNCGO76070 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNCGO76070 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNCGO76070 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNCGO76070 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNCGO76070 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNCGO76070 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SNCGO76070 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC16.34■□□□□ 0.21
SNCGO76070 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNCGO76070 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNCGO76070 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SNCGO76070 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SNCGO76070 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SNCGO76070 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNCGO76070 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNCGO76070 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.33■□□□□ 0.21
SNCGO76070 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SNCGO76070 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SNCGO76070 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.33■□□□□ 0.2
SNCGO76070 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SNCGO76070 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNCGO76070 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.33■□□□□ 0.2
SNCGO76070 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNCGO76070 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNCGO76070 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNCGO76070 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNCGO76070 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNCGO76070 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNCGO76070 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNCGO76070 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNCGO76070 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNCGO76070 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SNCGO76070 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNCGO76070 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNCGO76070 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNCGO76070 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNCGO76070 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SNCGO76070 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNCGO76070 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNCGO76070 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNCGO76070 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC16.31■□□□□ 0.2
SNCGO76070 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNCGO76070 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNCGO76070 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNCGO76070 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNCGO76070 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC16.3■□□□□ 0.2
SNCGO76070 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNCGO76070 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNCGO76070 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNCGO76070 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SNCGO76070 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNCGO76070 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SNCGO76070 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNCGO76070 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNCGO76070 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SNCGO76070 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC16.29■□□□□ 0.2
SNCGO76070 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNCGO76070 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNCGO76070 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNCGO76070 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNCGO76070 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNCGO76070 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SNCGO76070 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNCGO76070 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNCGO76070 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.28■□□□□ 0.2
SNCGO76070 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNCGO76070 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNCGO76070 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNCGO76070 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNCGO76070 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SNCGO76070 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNCGO76070 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNCGO76070 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNCGO76070 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNCGO76070 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SNCGO76070 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNCGO76070 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNCGO76070 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
SNCGO76070 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SNCGO76070 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNCGO76070 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNCGO76070 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNCGO76070 AC091060.1-201ENST00000623524 1766 ntBASIC16.26■□□□□ 0.19
SNCGO76070 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNCGO76070 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms