Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.59■□□□□ 0.41
SMKR1H3BMG3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMKR1H3BMG3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.59■□□□□ 0.41
SMKR1H3BMG3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC17.59■□□□□ 0.41
SMKR1H3BMG3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMKR1H3BMG3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SMKR1H3BMG3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SMKR1H3BMG3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMKR1H3BMG3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMKR1H3BMG3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.58■□□□□ 0.41
SMKR1H3BMG3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMKR1H3BMG3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMKR1H3BMG3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.58■□□□□ 0.4
SMKR1H3BMG3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.58■□□□□ 0.4
SMKR1H3BMG3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMKR1H3BMG3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMKR1H3BMG3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SMKR1H3BMG3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
SMKR1H3BMG3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMKR1H3BMG3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
SMKR1H3BMG3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SMKR1H3BMG3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMKR1H3BMG3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.57■□□□□ 0.4
SMKR1H3BMG3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SMKR1H3BMG3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SMKR1H3BMG3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SMKR1H3BMG3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMKR1H3BMG3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMKR1H3BMG3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMKR1H3BMG3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SMKR1H3BMG3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMKR1H3BMG3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.56■□□□□ 0.4
SMKR1H3BMG3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMKR1H3BMG3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMKR1H3BMG3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMKR1H3BMG3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMKR1H3BMG3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMKR1H3BMG3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.55■□□□□ 0.4
SMKR1H3BMG3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMKR1H3BMG3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMKR1H3BMG3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMKR1H3BMG3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
SMKR1H3BMG3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.54■□□□□ 0.4
SMKR1H3BMG3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SMKR1H3BMG3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMKR1H3BMG3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.54■□□□□ 0.4
SMKR1H3BMG3 MIR6090-201ENST00000622481 60 ntBASIC17.54■□□□□ 0.4
SMKR1H3BMG3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMKR1H3BMG3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMKR1H3BMG3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMKR1H3BMG3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.53■□□□□ 0.4
SMKR1H3BMG3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMKR1H3BMG3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
SMKR1H3BMG3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SMKR1H3BMG3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.53■□□□□ 0.4
SMKR1H3BMG3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMKR1H3BMG3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMKR1H3BMG3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMKR1H3BMG3 LINC01124-201ENST00000409786 2117 ntBASIC17.52■□□□□ 0.4
SMKR1H3BMG3 AC108673.1-201ENST00000510422 1159 ntBASIC17.52■□□□□ 0.4
SMKR1H3BMG3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SMKR1H3BMG3 AC136428.2-201ENST00000563187 214 ntBASIC17.52■□□□□ 0.4
SMKR1H3BMG3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.52■□□□□ 0.39
SMKR1H3BMG3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC17.51■□□□□ 0.39
SMKR1H3BMG3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.51■□□□□ 0.39
SMKR1H3BMG3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMKR1H3BMG3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SMKR1H3BMG3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMKR1H3BMG3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17.51■□□□□ 0.39
SMKR1H3BMG3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SMKR1H3BMG3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC17.5■□□□□ 0.39
SMKR1H3BMG3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.5■□□□□ 0.39
SMKR1H3BMG3 CHML-205ENST00000638160 705 ntTSL 3 BASIC17.5■□□□□ 0.39
SMKR1H3BMG3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMKR1H3BMG3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMKR1H3BMG3 AC012676.1-201ENST00000574705 1949 ntBASIC17.49■□□□□ 0.39
SMKR1H3BMG3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMKR1H3BMG3 AC110285.7-201ENST00000624417 1536 ntBASIC17.49■□□□□ 0.39
SMKR1H3BMG3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SMKR1H3BMG3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMKR1H3BMG3 AC096887.2-201ENST00000623443 1957 ntBASIC17.48■□□□□ 0.39
SMKR1H3BMG3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SMKR1H3BMG3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMKR1H3BMG3 AC097358.2-201ENST00000607541 1159 ntBASIC17.48■□□□□ 0.39
SMKR1H3BMG3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMKR1H3BMG3 AC068473.5-201ENST00000616428 2072 ntBASIC17.48■□□□□ 0.39
SMKR1H3BMG3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SMKR1H3BMG3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.47■□□□□ 0.39
SMKR1H3BMG3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SMKR1H3BMG3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMKR1H3BMG3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMKR1H3BMG3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMKR1H3BMG3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.47■□□□□ 0.39
SMKR1H3BMG3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SMKR1H3BMG3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMKR1H3BMG3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
SMKR1H3BMG3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMKR1H3BMG3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SMKR1H3BMG3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMKR1H3BMG3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms