Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
RBFOX3A6NFN3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RBFOX3A6NFN3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RBFOX3A6NFN3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RBFOX3A6NFN3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RBFOX3A6NFN3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
RBFOX3A6NFN3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RBFOX3A6NFN3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RBFOX3A6NFN3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RBFOX3A6NFN3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RBFOX3A6NFN3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RBFOX3A6NFN3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RBFOX3A6NFN3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RBFOX3A6NFN3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.05■□□□□ 0.64
RBFOX3A6NFN3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RBFOX3A6NFN3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RBFOX3A6NFN3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RBFOX3A6NFN3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RBFOX3A6NFN3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RBFOX3A6NFN3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.04■□□□□ 0.64
RBFOX3A6NFN3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RBFOX3A6NFN3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RBFOX3A6NFN3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RBFOX3A6NFN3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.03■□□□□ 0.64
RBFOX3A6NFN3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
RBFOX3A6NFN3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RBFOX3A6NFN3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RBFOX3A6NFN3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
RBFOX3A6NFN3 DUSP8P5-201ENST00000422884 1815 ntBASIC19.02■□□□□ 0.64
RBFOX3A6NFN3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RBFOX3A6NFN3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RBFOX3A6NFN3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RBFOX3A6NFN3 AP002365.1-201ENST00000603448 772 ntBASIC19.02■□□□□ 0.64
RBFOX3A6NFN3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
RBFOX3A6NFN3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.02■□□□□ 0.63
RBFOX3A6NFN3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RBFOX3A6NFN3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RBFOX3A6NFN3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RBFOX3A6NFN3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RBFOX3A6NFN3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RBFOX3A6NFN3 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.01■□□□□ 0.63
RBFOX3A6NFN3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RBFOX3A6NFN3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RBFOX3A6NFN3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RBFOX3A6NFN3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RBFOX3A6NFN3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RBFOX3A6NFN3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19■□□□□ 0.63
RBFOX3A6NFN3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RBFOX3A6NFN3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RBFOX3A6NFN3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RBFOX3A6NFN3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RBFOX3A6NFN3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19■□□□□ 0.63
RBFOX3A6NFN3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RBFOX3A6NFN3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RBFOX3A6NFN3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RBFOX3A6NFN3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RBFOX3A6NFN3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19■□□□□ 0.63
RBFOX3A6NFN3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RBFOX3A6NFN3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
RBFOX3A6NFN3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RBFOX3A6NFN3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RBFOX3A6NFN3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RBFOX3A6NFN3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RBFOX3A6NFN3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RBFOX3A6NFN3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RBFOX3A6NFN3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RBFOX3A6NFN3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.99■□□□□ 0.63
RBFOX3A6NFN3 AC096887.2-201ENST00000623443 1957 ntBASIC18.99■□□□□ 0.63
RBFOX3A6NFN3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.98■□□□□ 0.63
RBFOX3A6NFN3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RBFOX3A6NFN3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RBFOX3A6NFN3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RBFOX3A6NFN3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RBFOX3A6NFN3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.98■□□□□ 0.63
RBFOX3A6NFN3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RBFOX3A6NFN3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
RBFOX3A6NFN3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RBFOX3A6NFN3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RBFOX3A6NFN3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
RBFOX3A6NFN3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RBFOX3A6NFN3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RBFOX3A6NFN3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RBFOX3A6NFN3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
RBFOX3A6NFN3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RBFOX3A6NFN3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RBFOX3A6NFN3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
RBFOX3A6NFN3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RBFOX3A6NFN3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RBFOX3A6NFN3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RBFOX3A6NFN3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RBFOX3A6NFN3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RBFOX3A6NFN3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
RBFOX3A6NFN3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RBFOX3A6NFN3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RBFOX3A6NFN3 AC135983.2-203ENST00000454486 1613 ntBASIC18.94■□□□□ 0.62
RBFOX3A6NFN3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.94■□□□□ 0.62
RBFOX3A6NFN3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RBFOX3A6NFN3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RBFOX3A6NFN3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RBFOX3A6NFN3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms