Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SH3D21A4FU49 AC142472.1-201ENST00000612013 1741 ntBASIC22.31■■□□□ 1.16
SH3D21A4FU49 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3D21A4FU49 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3D21A4FU49 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.31■■□□□ 1.16
SH3D21A4FU49 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3D21A4FU49 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.31■■□□□ 1.16
SH3D21A4FU49 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SH3D21A4FU49 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
SH3D21A4FU49 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3D21A4FU49 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
SH3D21A4FU49 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.3■■□□□ 1.16
SH3D21A4FU49 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SH3D21A4FU49 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.3■■□□□ 1.16
SH3D21A4FU49 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
SH3D21A4FU49 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH3D21A4FU49 ERN1-208ENST00000606895 2068 ntBASIC22.29■■□□□ 1.16
SH3D21A4FU49 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SH3D21A4FU49 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SH3D21A4FU49 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.28■■□□□ 1.16
SH3D21A4FU49 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SH3D21A4FU49 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
SH3D21A4FU49 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SH3D21A4FU49 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3D21A4FU49 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3D21A4FU49 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SH3D21A4FU49 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SH3D21A4FU49 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SH3D21A4FU49 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.27■■□□□ 1.16
SH3D21A4FU49 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SH3D21A4FU49 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3D21A4FU49 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3D21A4FU49 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SH3D21A4FU49 AC148477.6-201ENST00000623746 465 ntBASIC22.26■■□□□ 1.15
SH3D21A4FU49 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
SH3D21A4FU49 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SH3D21A4FU49 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SH3D21A4FU49 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.25■■□□□ 1.15
SH3D21A4FU49 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SH3D21A4FU49 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SH3D21A4FU49 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
SH3D21A4FU49 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SH3D21A4FU49 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
SH3D21A4FU49 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SH3D21A4FU49 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SH3D21A4FU49 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.24■■□□□ 1.15
SH3D21A4FU49 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
SH3D21A4FU49 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.24■■□□□ 1.15
SH3D21A4FU49 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
SH3D21A4FU49 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SH3D21A4FU49 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.24■■□□□ 1.15
SH3D21A4FU49 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SH3D21A4FU49 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH3D21A4FU49 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH3D21A4FU49 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.23■■□□□ 1.15
SH3D21A4FU49 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SH3D21A4FU49 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH3D21A4FU49 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SH3D21A4FU49 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH3D21A4FU49 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH3D21A4FU49 AC142381.3-201ENST00000568208 1670 ntBASIC22.21■■□□□ 1.15
SH3D21A4FU49 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.21■■□□□ 1.15
SH3D21A4FU49 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.21■■□□□ 1.15
SH3D21A4FU49 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.2■■□□□ 1.15
SH3D21A4FU49 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.15
SH3D21A4FU49 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
SH3D21A4FU49 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
SH3D21A4FU49 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
SH3D21A4FU49 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.2■■□□□ 1.14
SH3D21A4FU49 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
SH3D21A4FU49 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH3D21A4FU49 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
SH3D21A4FU49 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.2■■□□□ 1.14
SH3D21A4FU49 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SH3D21A4FU49 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SH3D21A4FU49 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.19■■□□□ 1.14
SH3D21A4FU49 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SH3D21A4FU49 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SH3D21A4FU49 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.19■■□□□ 1.14
SH3D21A4FU49 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
SH3D21A4FU49 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH3D21A4FU49 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH3D21A4FU49 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.18■■□□□ 1.14
SH3D21A4FU49 AC010501.1-201ENST00000606270 1962 ntBASIC22.18■■□□□ 1.14
SH3D21A4FU49 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH3D21A4FU49 MIR219A2-201ENST00000608502 1504 ntBASIC22.18■■□□□ 1.14
SH3D21A4FU49 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.18■■□□□ 1.14
SH3D21A4FU49 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH3D21A4FU49 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.18■■□□□ 1.14
SH3D21A4FU49 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
SH3D21A4FU49 NTF6A-201ENST00000591175 560 ntBASIC22.18■■□□□ 1.14
SH3D21A4FU49 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH3D21A4FU49 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.17■■□□□ 1.14
SH3D21A4FU49 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH3D21A4FU49 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH3D21A4FU49 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.17■■□□□ 1.14
SH3D21A4FU49 AC060814.1-201ENST00000554326 538 ntBASIC22.17■■□□□ 1.14
SH3D21A4FU49 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
SH3D21A4FU49 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SH3D21A4FU49 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms