Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF103-CHMP3A0A140T963 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
RNF103-CHMP3A0A140T963 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
RNF103-CHMP3A0A140T963 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.07■■□□□ 1.28
RNF103-CHMP3A0A140T963 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF103-CHMP3A0A140T963 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF103-CHMP3A0A140T963 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF103-CHMP3A0A140T963 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF103-CHMP3A0A140T963 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.07■■□□□ 1.28
RNF103-CHMP3A0A140T963 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF103-CHMP3A0A140T963 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.06■■□□□ 1.28
RNF103-CHMP3A0A140T963 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RNF103-CHMP3A0A140T963 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF103-CHMP3A0A140T963 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF103-CHMP3A0A140T963 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNF103-CHMP3A0A140T963 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF103-CHMP3A0A140T963 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF103-CHMP3A0A140T963 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.05■■□□□ 1.28
RNF103-CHMP3A0A140T963 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.05■■□□□ 1.28
RNF103-CHMP3A0A140T963 HLA-V-202ENST00000446817 847 ntBASIC23.05■■□□□ 1.28
RNF103-CHMP3A0A140T963 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RNF103-CHMP3A0A140T963 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RNF103-CHMP3A0A140T963 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF103-CHMP3A0A140T963 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RNF103-CHMP3A0A140T963 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RNF103-CHMP3A0A140T963 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF103-CHMP3A0A140T963 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF103-CHMP3A0A140T963 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.04■■□□□ 1.28
RNF103-CHMP3A0A140T963 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF103-CHMP3A0A140T963 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RNF103-CHMP3A0A140T963 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF103-CHMP3A0A140T963 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.04■■□□□ 1.28
RNF103-CHMP3A0A140T963 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.04■■□□□ 1.28
RNF103-CHMP3A0A140T963 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RNF103-CHMP3A0A140T963 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.03■■□□□ 1.28
RNF103-CHMP3A0A140T963 ABHD17AP4-201ENST00000411545 909 ntBASIC23.03■■□□□ 1.28
RNF103-CHMP3A0A140T963 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.03■■□□□ 1.28
RNF103-CHMP3A0A140T963 CR559946.2-201ENST00000623684 991 ntBASIC23.03■■□□□ 1.28
RNF103-CHMP3A0A140T963 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.03■■□□□ 1.28
RNF103-CHMP3A0A140T963 ERN1-208ENST00000606895 2068 ntBASIC23.03■■□□□ 1.28
RNF103-CHMP3A0A140T963 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
RNF103-CHMP3A0A140T963 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RNF103-CHMP3A0A140T963 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF103-CHMP3A0A140T963 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
RNF103-CHMP3A0A140T963 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RNF103-CHMP3A0A140T963 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF103-CHMP3A0A140T963 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.02■■□□□ 1.28
RNF103-CHMP3A0A140T963 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF103-CHMP3A0A140T963 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF103-CHMP3A0A140T963 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF103-CHMP3A0A140T963 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.01■■□□□ 1.27
RNF103-CHMP3A0A140T963 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF103-CHMP3A0A140T963 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF103-CHMP3A0A140T963 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF103-CHMP3A0A140T963 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF103-CHMP3A0A140T963 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF103-CHMP3A0A140T963 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF103-CHMP3A0A140T963 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF103-CHMP3A0A140T963 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF103-CHMP3A0A140T963 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23■■□□□ 1.27
RNF103-CHMP3A0A140T963 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23■■□□□ 1.27
RNF103-CHMP3A0A140T963 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23■■□□□ 1.27
RNF103-CHMP3A0A140T963 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
RNF103-CHMP3A0A140T963 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23■■□□□ 1.27
RNF103-CHMP3A0A140T963 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RNF103-CHMP3A0A140T963 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF103-CHMP3A0A140T963 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
RNF103-CHMP3A0A140T963 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.99■■□□□ 1.27
RNF103-CHMP3A0A140T963 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF103-CHMP3A0A140T963 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RNF103-CHMP3A0A140T963 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF103-CHMP3A0A140T963 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF103-CHMP3A0A140T963 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
RNF103-CHMP3A0A140T963 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
RNF103-CHMP3A0A140T963 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF103-CHMP3A0A140T963 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RNF103-CHMP3A0A140T963 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.97■■□□□ 1.27
RNF103-CHMP3A0A140T963 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
RNF103-CHMP3A0A140T963 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF103-CHMP3A0A140T963 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF103-CHMP3A0A140T963 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF103-CHMP3A0A140T963 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RNF103-CHMP3A0A140T963 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF103-CHMP3A0A140T963 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.96■■□□□ 1.27
RNF103-CHMP3A0A140T963 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.96■■□□□ 1.27
RNF103-CHMP3A0A140T963 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF103-CHMP3A0A140T963 AL359258.2-201ENST00000564063 1566 ntBASIC22.96■■□□□ 1.27
RNF103-CHMP3A0A140T963 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.96■■□□□ 1.27
RNF103-CHMP3A0A140T963 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
RNF103-CHMP3A0A140T963 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF103-CHMP3A0A140T963 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
RNF103-CHMP3A0A140T963 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.95■■□□□ 1.26
RNF103-CHMP3A0A140T963 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RNF103-CHMP3A0A140T963 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
RNF103-CHMP3A0A140T963 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RNF103-CHMP3A0A140T963 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
RNF103-CHMP3A0A140T963 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
RNF103-CHMP3A0A140T963 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.94■■□□□ 1.26
RNF103-CHMP3A0A140T963 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RNF103-CHMP3A0A140T963 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms