Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV24A0A0B4J272 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV24A0A0B4J272 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV24A0A0B4J272 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV24A0A0B4J272 MIR639-201ENST00000384974 98 ntBASIC20.29■□□□□ 0.84
TRAV24A0A0B4J272 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.29■□□□□ 0.84
TRAV24A0A0B4J272 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TRAV24A0A0B4J272 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV24A0A0B4J272 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV24A0A0B4J272 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV24A0A0B4J272 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV24A0A0B4J272 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV24A0A0B4J272 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV24A0A0B4J272 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV24A0A0B4J272 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV24A0A0B4J272 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAV24A0A0B4J272 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV24A0A0B4J272 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV24A0A0B4J272 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV24A0A0B4J272 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV24A0A0B4J272 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV24A0A0B4J272 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV24A0A0B4J272 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TRAV24A0A0B4J272 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV24A0A0B4J272 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
TRAV24A0A0B4J272 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TRAV24A0A0B4J272 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV24A0A0B4J272 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
TRAV24A0A0B4J272 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.27■□□□□ 0.84
TRAV24A0A0B4J272 AL157400.5-201ENST00000507624 621 ntBASIC20.27■□□□□ 0.84
TRAV24A0A0B4J272 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRAV24A0A0B4J272 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV24A0A0B4J272 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRAV24A0A0B4J272 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV24A0A0B4J272 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV24A0A0B4J272 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV24A0A0B4J272 AC060814.1-201ENST00000554326 538 ntBASIC20.26■□□□□ 0.83
TRAV24A0A0B4J272 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV24A0A0B4J272 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV24A0A0B4J272 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.26■□□□□ 0.83
TRAV24A0A0B4J272 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV24A0A0B4J272 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAV24A0A0B4J272 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV24A0A0B4J272 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TRAV24A0A0B4J272 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.25■□□□□ 0.83
TRAV24A0A0B4J272 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.25■□□□□ 0.83
TRAV24A0A0B4J272 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV24A0A0B4J272 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV24A0A0B4J272 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV24A0A0B4J272 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TRAV24A0A0B4J272 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV24A0A0B4J272 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV24A0A0B4J272 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV24A0A0B4J272 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.24■□□□□ 0.83
TRAV24A0A0B4J272 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV24A0A0B4J272 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV24A0A0B4J272 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TRAV24A0A0B4J272 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV24A0A0B4J272 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
TRAV24A0A0B4J272 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV24A0A0B4J272 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.24■□□□□ 0.83
TRAV24A0A0B4J272 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV24A0A0B4J272 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.23■□□□□ 0.83
TRAV24A0A0B4J272 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV24A0A0B4J272 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV24A0A0B4J272 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAV24A0A0B4J272 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV24A0A0B4J272 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV24A0A0B4J272 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAV24A0A0B4J272 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.22■□□□□ 0.83
TRAV24A0A0B4J272 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV24A0A0B4J272 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TRAV24A0A0B4J272 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV24A0A0B4J272 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAV24A0A0B4J272 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV24A0A0B4J272 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.21■□□□□ 0.83
TRAV24A0A0B4J272 AC025884.2-201ENST00000553429 711 ntBASIC20.21■□□□□ 0.83
TRAV24A0A0B4J272 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV24A0A0B4J272 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV24A0A0B4J272 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV24A0A0B4J272 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV24A0A0B4J272 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV24A0A0B4J272 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV24A0A0B4J272 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV24A0A0B4J272 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAV24A0A0B4J272 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAV24A0A0B4J272 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.2■□□□□ 0.82
TRAV24A0A0B4J272 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAV24A0A0B4J272 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV24A0A0B4J272 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV24A0A0B4J272 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV24A0A0B4J272 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV24A0A0B4J272 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAV24A0A0B4J272 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.19■□□□□ 0.82
TRAV24A0A0B4J272 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV24A0A0B4J272 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAV24A0A0B4J272 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV24A0A0B4J272 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV24A0A0B4J272 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV24A0A0B4J272 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms