Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-6A0A0B4J262 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV8-6A0A0B4J262 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV8-6A0A0B4J262 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.59■□□□□ 0.41
TRAV8-6A0A0B4J262 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV8-6A0A0B4J262 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV8-6A0A0B4J262 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV8-6A0A0B4J262 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAV8-6A0A0B4J262 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV8-6A0A0B4J262 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TRAV8-6A0A0B4J262 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.57■□□□□ 0.4
TRAV8-6A0A0B4J262 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-6A0A0B4J262 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-6A0A0B4J262 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV8-6A0A0B4J262 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-6A0A0B4J262 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV8-6A0A0B4J262 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-6A0A0B4J262 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-6A0A0B4J262 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.56■□□□□ 0.4
TRAV8-6A0A0B4J262 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-6A0A0B4J262 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV8-6A0A0B4J262 WHAMMP2-203ENST00000563942 1603 ntBASIC17.56■□□□□ 0.4
TRAV8-6A0A0B4J262 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV8-6A0A0B4J262 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-6A0A0B4J262 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV8-6A0A0B4J262 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV8-6A0A0B4J262 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRAV8-6A0A0B4J262 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRAV8-6A0A0B4J262 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAV8-6A0A0B4J262 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV8-6A0A0B4J262 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV8-6A0A0B4J262 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV8-6A0A0B4J262 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV8-6A0A0B4J262 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV8-6A0A0B4J262 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
TRAV8-6A0A0B4J262 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-6A0A0B4J262 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV8-6A0A0B4J262 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-6A0A0B4J262 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-6A0A0B4J262 LINC01971-201ENST00000617888 1048 ntBASIC17.54■□□□□ 0.4
TRAV8-6A0A0B4J262 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV8-6A0A0B4J262 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV8-6A0A0B4J262 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-6A0A0B4J262 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV8-6A0A0B4J262 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-6A0A0B4J262 ABHD17AP4-201ENST00000411545 909 ntBASIC17.53■□□□□ 0.4
TRAV8-6A0A0B4J262 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-6A0A0B4J262 ZNRF2P2-203ENST00000454624 420 ntBASIC17.53■□□□□ 0.4
TRAV8-6A0A0B4J262 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-6A0A0B4J262 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-6A0A0B4J262 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV8-6A0A0B4J262 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV8-6A0A0B4J262 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV8-6A0A0B4J262 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV8-6A0A0B4J262 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV8-6A0A0B4J262 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV8-6A0A0B4J262 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV8-6A0A0B4J262 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV8-6A0A0B4J262 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV8-6A0A0B4J262 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRAV8-6A0A0B4J262 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-6A0A0B4J262 AC100797.4-201ENST00000631653 1827 ntBASIC17.51■□□□□ 0.39
TRAV8-6A0A0B4J262 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-6A0A0B4J262 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRAV8-6A0A0B4J262 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV8-6A0A0B4J262 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV8-6A0A0B4J262 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TRAV8-6A0A0B4J262 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV8-6A0A0B4J262 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV8-6A0A0B4J262 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAV8-6A0A0B4J262 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV8-6A0A0B4J262 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV8-6A0A0B4J262 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV8-6A0A0B4J262 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV8-6A0A0B4J262 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV8-6A0A0B4J262 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAV8-6A0A0B4J262 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV8-6A0A0B4J262 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV8-6A0A0B4J262 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV8-6A0A0B4J262 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
TRAV8-6A0A0B4J262 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV8-6A0A0B4J262 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV8-6A0A0B4J262 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV8-6A0A0B4J262 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.48■□□□□ 0.39
TRAV8-6A0A0B4J262 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.48■□□□□ 0.39
TRAV8-6A0A0B4J262 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV8-6A0A0B4J262 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV8-6A0A0B4J262 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV8-6A0A0B4J262 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV8-6A0A0B4J262 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV8-6A0A0B4J262 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV8-6A0A0B4J262 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV8-6A0A0B4J262 AC068473.5-201ENST00000616428 2072 ntBASIC17.47■□□□□ 0.39
TRAV8-6A0A0B4J262 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TRAV8-6A0A0B4J262 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAV8-6A0A0B4J262 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV8-6A0A0B4J262 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV8-6A0A0B4J262 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV8-6A0A0B4J262 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRAV8-6A0A0B4J262 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms