Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV9-1A0A075B6T8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV9-1A0A075B6T8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV9-1A0A075B6T8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV9-1A0A075B6T8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV9-1A0A075B6T8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV9-1A0A075B6T8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV9-1A0A075B6T8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV9-1A0A075B6T8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV9-1A0A075B6T8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV9-1A0A075B6T8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV9-1A0A075B6T8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV9-1A0A075B6T8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV9-1A0A075B6T8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV9-1A0A075B6T8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV9-1A0A075B6T8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV9-1A0A075B6T8 AC141586.4-201ENST00000624558 1573 ntBASIC18.17■□□□□ 0.5
TRAV9-1A0A075B6T8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV9-1A0A075B6T8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRAV9-1A0A075B6T8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV9-1A0A075B6T8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAV9-1A0A075B6T8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.17■□□□□ 0.5
TRAV9-1A0A075B6T8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV9-1A0A075B6T8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV9-1A0A075B6T8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV9-1A0A075B6T8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV9-1A0A075B6T8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV9-1A0A075B6T8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV9-1A0A075B6T8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV9-1A0A075B6T8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV9-1A0A075B6T8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV9-1A0A075B6T8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAV9-1A0A075B6T8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV9-1A0A075B6T8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV9-1A0A075B6T8 AL031258.1-201ENST00000623562 325 ntBASIC18.15■□□□□ 0.5
TRAV9-1A0A075B6T8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV9-1A0A075B6T8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV9-1A0A075B6T8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV9-1A0A075B6T8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV9-1A0A075B6T8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV9-1A0A075B6T8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV9-1A0A075B6T8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV9-1A0A075B6T8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV9-1A0A075B6T8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV9-1A0A075B6T8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV9-1A0A075B6T8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV9-1A0A075B6T8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV9-1A0A075B6T8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV9-1A0A075B6T8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV9-1A0A075B6T8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV9-1A0A075B6T8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV9-1A0A075B6T8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
TRAV9-1A0A075B6T8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV9-1A0A075B6T8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
TRAV9-1A0A075B6T8 AL133380.1-201ENST00000506013 324 ntBASIC18.12■□□□□ 0.49
TRAV9-1A0A075B6T8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV9-1A0A075B6T8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV9-1A0A075B6T8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV9-1A0A075B6T8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV9-1A0A075B6T8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV9-1A0A075B6T8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRAV9-1A0A075B6T8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV9-1A0A075B6T8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV9-1A0A075B6T8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV9-1A0A075B6T8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV9-1A0A075B6T8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV9-1A0A075B6T8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV9-1A0A075B6T8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAV9-1A0A075B6T8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV9-1A0A075B6T8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV9-1A0A075B6T8 AL117328.2-201ENST00000624617 1940 ntBASIC18.1■□□□□ 0.49
TRAV9-1A0A075B6T8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV9-1A0A075B6T8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
TRAV9-1A0A075B6T8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV9-1A0A075B6T8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV9-1A0A075B6T8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV9-1A0A075B6T8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRAV9-1A0A075B6T8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV9-1A0A075B6T8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV9-1A0A075B6T8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV9-1A0A075B6T8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV9-1A0A075B6T8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRAV9-1A0A075B6T8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV9-1A0A075B6T8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV9-1A0A075B6T8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV9-1A0A075B6T8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV9-1A0A075B6T8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV9-1A0A075B6T8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV9-1A0A075B6T8 WHAMMP2-203ENST00000563942 1603 ntBASIC18.09■□□□□ 0.49
TRAV9-1A0A075B6T8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV9-1A0A075B6T8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV9-1A0A075B6T8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV9-1A0A075B6T8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAV9-1A0A075B6T8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV9-1A0A075B6T8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
TRAV9-1A0A075B6T8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV9-1A0A075B6T8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
TRAV9-1A0A075B6T8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV9-1A0A075B6T8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV9-1A0A075B6T8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms