Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.28■□□□□ 0.36
TRBV25-1A0A075B6N4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
TRBV25-1A0A075B6N4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRBV25-1A0A075B6N4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV25-1A0A075B6N4 CLDN5-201ENST00000403084 2357 ntBASIC17.27■□□□□ 0.36
TRBV25-1A0A075B6N4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TRBV25-1A0A075B6N4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.27■□□□□ 0.36
TRBV25-1A0A075B6N4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV25-1A0A075B6N4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV25-1A0A075B6N4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV25-1A0A075B6N4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV25-1A0A075B6N4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV25-1A0A075B6N4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV25-1A0A075B6N4 AC021231.2-201ENST00000594613 730 ntBASIC17.26■□□□□ 0.35
TRBV25-1A0A075B6N4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV25-1A0A075B6N4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV25-1A0A075B6N4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV25-1A0A075B6N4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV25-1A0A075B6N4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.25■□□□□ 0.35
TRBV25-1A0A075B6N4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV25-1A0A075B6N4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV25-1A0A075B6N4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.25■□□□□ 0.35
TRBV25-1A0A075B6N4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRBV25-1A0A075B6N4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV25-1A0A075B6N4 AP004609.3-201ENST00000610705 1884 ntBASIC17.24■□□□□ 0.35
TRBV25-1A0A075B6N4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRBV25-1A0A075B6N4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRBV25-1A0A075B6N4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV25-1A0A075B6N4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV25-1A0A075B6N4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV25-1A0A075B6N4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV25-1A0A075B6N4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.23■□□□□ 0.35
TRBV25-1A0A075B6N4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV25-1A0A075B6N4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV25-1A0A075B6N4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV25-1A0A075B6N4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV25-1A0A075B6N4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV25-1A0A075B6N4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV25-1A0A075B6N4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV25-1A0A075B6N4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV25-1A0A075B6N4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV25-1A0A075B6N4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV25-1A0A075B6N4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRBV25-1A0A075B6N4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV25-1A0A075B6N4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV25-1A0A075B6N4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBV25-1A0A075B6N4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRBV25-1A0A075B6N4 WHAMMP3-201ENST00000611636 1609 ntBASIC17.21■□□□□ 0.35
TRBV25-1A0A075B6N4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRBV25-1A0A075B6N4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV25-1A0A075B6N4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV25-1A0A075B6N4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.2■□□□□ 0.34
TRBV25-1A0A075B6N4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV25-1A0A075B6N4 AC068473.5-201ENST00000616428 2072 ntBASIC17.2■□□□□ 0.34
TRBV25-1A0A075B6N4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.2■□□□□ 0.34
TRBV25-1A0A075B6N4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV25-1A0A075B6N4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TRBV25-1A0A075B6N4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.19■□□□□ 0.34
TRBV25-1A0A075B6N4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRBV25-1A0A075B6N4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRBV25-1A0A075B6N4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV25-1A0A075B6N4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.19■□□□□ 0.34
TRBV25-1A0A075B6N4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.18■□□□□ 0.34
TRBV25-1A0A075B6N4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TRBV25-1A0A075B6N4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV25-1A0A075B6N4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV25-1A0A075B6N4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV25-1A0A075B6N4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV25-1A0A075B6N4 AC142472.1-201ENST00000612013 1741 ntBASIC17.17■□□□□ 0.34
TRBV25-1A0A075B6N4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV25-1A0A075B6N4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV25-1A0A075B6N4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV25-1A0A075B6N4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV25-1A0A075B6N4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV25-1A0A075B6N4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV25-1A0A075B6N4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV25-1A0A075B6N4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV25-1A0A075B6N4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV25-1A0A075B6N4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV25-1A0A075B6N4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV25-1A0A075B6N4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV25-1A0A075B6N4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV25-1A0A075B6N4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV25-1A0A075B6N4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.15■□□□□ 0.34
TRBV25-1A0A075B6N4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.15■□□□□ 0.34
TRBV25-1A0A075B6N4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV25-1A0A075B6N4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV25-1A0A075B6N4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRBV25-1A0A075B6N4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV25-1A0A075B6N4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TRBV25-1A0A075B6N4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV25-1A0A075B6N4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.14■□□□□ 0.33
TRBV25-1A0A075B6N4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.14■□□□□ 0.33
TRBV25-1A0A075B6N4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV25-1A0A075B6N4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV25-1A0A075B6N4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.14■□□□□ 0.33
TRBV25-1A0A075B6N4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.14■□□□□ 0.33
TRBV25-1A0A075B6N4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV25-1A0A075B6N4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV25-1A0A075B6N4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms