Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 CYP2A7P1-201ENST00000595391 815 ntBASIC25.68■■□□□ 1.7
CDC42BPBQ9Y5S2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC25.68■■□□□ 1.7
CDC42BPBQ9Y5S2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 AC027369.6-201ENST00000525520 931 ntBASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 MIR4492-201ENST00000581627 80 ntBASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 TOP3BP1-201ENST00000420768 1380 ntBASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDC42BPBQ9Y5S2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 GK-202ENST00000378941 458 ntTSL 3 BASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 WASH4P-201ENST00000564273 1246 ntBASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 AL662799.1-202ENST00000614205 422 ntBASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDC42BPBQ9Y5S2 AC104581.1-202ENST00000635932 2618 ntBASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 AC012317.2-201ENST00000623305 2251 ntBASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 AL354751.1-201ENST00000412768 1863 ntBASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 AL080243.2-201ENST00000418783 582 ntBASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 TEX28P1-201ENST00000613479 1221 ntBASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 TEX28P2-201ENST00000617764 1221 ntBASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC25.65■■□□□ 1.7
CDC42BPBQ9Y5S2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 FAM220BP-201ENST00000377689 816 ntBASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 PIN1P1-201ENST00000412108 996 ntBASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 CDK2AP2P3-201ENST00000422476 372 ntBASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 AL132655.2-201ENST00000596276 594 ntBASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 IGHV3-72-202ENST00000621503 303 ntBASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC25.64■■□□□ 1.7
CDC42BPBQ9Y5S2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms