Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP4S1Q9Y587 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 NUDT16P1-203ENST00000513809 620 ntBASIC16.34■□□□□ 0.21
AP4S1Q9Y587 C1QBPP2-201ENST00000528754 825 ntBASIC16.34■□□□□ 0.21
AP4S1Q9Y587 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP4S1Q9Y587 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.33■□□□□ 0.21
AP4S1Q9Y587 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
AP4S1Q9Y587 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.21
AP4S1Q9Y587 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
AP4S1Q9Y587 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP4S1Q9Y587 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms