Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSX2IPQ9Y2D8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 AC254562.1-201ENST00000417586 456 ntBASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 AL353135.1-201ENST00000606729 504 ntBASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.54■□□□□ 0.56
SSX2IPQ9Y2D8 AC009949.1-201ENST00000623048 1830 ntBASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 AC096734.2-201ENST00000562054 433 ntBASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSX2IPQ9Y2D8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSX2IPQ9Y2D8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms