Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP25Q9UHP3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.81■□□□□ 0.76
USP25Q9UHP3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP25Q9UHP3 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.8■□□□□ 0.76
USP25Q9UHP3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.8■□□□□ 0.76
USP25Q9UHP3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP25Q9UHP3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.8■□□□□ 0.76
USP25Q9UHP3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP25Q9UHP3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP25Q9UHP3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP25Q9UHP3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
USP25Q9UHP3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
USP25Q9UHP3 AL645929.1-201ENST00000420084 975 ntBASIC19.8■□□□□ 0.76
USP25Q9UHP3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.8■□□□□ 0.76
USP25Q9UHP3 AL353801.3-201ENST00000609898 542 ntBASIC19.8■□□□□ 0.76
USP25Q9UHP3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
USP25Q9UHP3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.8■□□□□ 0.76
USP25Q9UHP3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
USP25Q9UHP3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP25Q9UHP3 AC026691.1-201ENST00000602502 2017 ntBASIC19.8■□□□□ 0.76
USP25Q9UHP3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP25Q9UHP3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.79■□□□□ 0.76
USP25Q9UHP3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.79■□□□□ 0.76
USP25Q9UHP3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP25Q9UHP3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP25Q9UHP3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP25Q9UHP3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP25Q9UHP3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.79■□□□□ 0.76
USP25Q9UHP3 MYCLP1-201ENST00000372451 1075 ntBASIC19.79■□□□□ 0.76
USP25Q9UHP3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.79■□□□□ 0.76
USP25Q9UHP3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.79■□□□□ 0.76
USP25Q9UHP3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP25Q9UHP3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
USP25Q9UHP3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.79■□□□□ 0.76
USP25Q9UHP3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.79■□□□□ 0.76
USP25Q9UHP3 RN7SL606P-201ENST00000472779 293 ntBASIC19.79■□□□□ 0.76
USP25Q9UHP3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.79■□□□□ 0.76
USP25Q9UHP3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
USP25Q9UHP3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
USP25Q9UHP3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.79■□□□□ 0.76
USP25Q9UHP3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.79■□□□□ 0.76
USP25Q9UHP3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.79■□□□□ 0.76
USP25Q9UHP3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
USP25Q9UHP3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP25Q9UHP3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.79■□□□□ 0.76
USP25Q9UHP3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
USP25Q9UHP3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP25Q9UHP3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP25Q9UHP3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.79■□□□□ 0.76
USP25Q9UHP3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.79■□□□□ 0.76
USP25Q9UHP3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP25Q9UHP3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP25Q9UHP3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.79■□□□□ 0.76
USP25Q9UHP3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP25Q9UHP3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP25Q9UHP3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP25Q9UHP3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP25Q9UHP3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 AC010460.3-201ENST00000511359 1579 ntBASIC19.78■□□□□ 0.76
USP25Q9UHP3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
USP25Q9UHP3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
USP25Q9UHP3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.78■□□□□ 0.76
USP25Q9UHP3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.78■□□□□ 0.76
USP25Q9UHP3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.78■□□□□ 0.76
USP25Q9UHP3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.78■□□□□ 0.76
USP25Q9UHP3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
USP25Q9UHP3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
USP25Q9UHP3 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.78■□□□□ 0.76
USP25Q9UHP3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.78■□□□□ 0.76
USP25Q9UHP3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.78■□□□□ 0.76
USP25Q9UHP3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.78■□□□□ 0.76
USP25Q9UHP3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP25Q9UHP3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP25Q9UHP3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.77■□□□□ 0.76
USP25Q9UHP3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.77■□□□□ 0.76
USP25Q9UHP3 AC006449.5-201ENST00000610658 2098 ntBASIC19.77■□□□□ 0.76
USP25Q9UHP3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP25Q9UHP3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
USP25Q9UHP3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms