Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
EBF1Q9UH73 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
EBF1Q9UH73 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF1Q9UH73 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
EBF1Q9UH73 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.55■□□□□ 0.4
EBF1Q9UH73 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.55■□□□□ 0.4
EBF1Q9UH73 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.55■□□□□ 0.4
EBF1Q9UH73 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF1Q9UH73 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF1Q9UH73 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF1Q9UH73 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EBF1Q9UH73 FAM8A3P-201ENST00000427218 844 ntBASIC17.55■□□□□ 0.4
EBF1Q9UH73 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF1Q9UH73 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.55■□□□□ 0.4
EBF1Q9UH73 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.55■□□□□ 0.4
EBF1Q9UH73 AP000344.2-201ENST00000512987 629 ntBASIC17.55■□□□□ 0.4
EBF1Q9UH73 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
EBF1Q9UH73 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.55■□□□□ 0.4
EBF1Q9UH73 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.55■□□□□ 0.4
EBF1Q9UH73 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
EBF1Q9UH73 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.55■□□□□ 0.4
EBF1Q9UH73 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.55■□□□□ 0.4
EBF1Q9UH73 STK25P1-201ENST00000585406 838 ntBASIC17.55■□□□□ 0.4
EBF1Q9UH73 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF1Q9UH73 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF1Q9UH73 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF1Q9UH73 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF1Q9UH73 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
EBF1Q9UH73 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.55■□□□□ 0.4
EBF1Q9UH73 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF1Q9UH73 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.55■□□□□ 0.4
EBF1Q9UH73 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
EBF1Q9UH73 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.55■□□□□ 0.4
EBF1Q9UH73 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.55■□□□□ 0.4
EBF1Q9UH73 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF1Q9UH73 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF1Q9UH73 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF1Q9UH73 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
EBF1Q9UH73 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
EBF1Q9UH73 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
EBF1Q9UH73 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
EBF1Q9UH73 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
EBF1Q9UH73 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.54■□□□□ 0.4
EBF1Q9UH73 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 BCAR1-209ENST00000546196 1340 ntBASIC17.54■□□□□ 0.4
EBF1Q9UH73 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
EBF1Q9UH73 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 MIR770-201ENST00000390219 98 ntBASIC17.54■□□□□ 0.4
EBF1Q9UH73 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 PTCHD3P3-201ENST00000403073 906 ntBASIC17.54■□□□□ 0.4
EBF1Q9UH73 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.54■□□□□ 0.4
EBF1Q9UH73 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.54■□□□□ 0.4
EBF1Q9UH73 AC074386.1-202ENST00000463561 864 ntBASIC17.54■□□□□ 0.4
EBF1Q9UH73 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.54■□□□□ 0.4
EBF1Q9UH73 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
EBF1Q9UH73 AC027612.4-201ENST00000605371 583 ntBASIC17.54■□□□□ 0.4
EBF1Q9UH73 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.54■□□□□ 0.4
EBF1Q9UH73 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
EBF1Q9UH73 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.54■□□□□ 0.4
EBF1Q9UH73 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
EBF1Q9UH73 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
EBF1Q9UH73 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.54■□□□□ 0.4
EBF1Q9UH73 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.54■□□□□ 0.4
EBF1Q9UH73 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EBF1Q9UH73 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EBF1Q9UH73 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EBF1Q9UH73 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
EBF1Q9UH73 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
EBF1Q9UH73 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.53■□□□□ 0.4
EBF1Q9UH73 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.53■□□□□ 0.4
EBF1Q9UH73 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EBF1Q9UH73 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms