Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 GUSBP12-201ENST00000513727 720 ntBASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LIN7CQ9NUP9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 CHCHD2P8-201ENST00000429873 447 ntBASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LIN7CQ9NUP9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 LINC02012-201ENST00000608206 1725 ntBASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 TSSC2-201ENST00000450217 709 ntBASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LIN7CQ9NUP9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms