Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 AC005332.3-201ENST00000589904 676 ntBASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 EMBP1-201ENST00000458200 901 ntBASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 AP003733.1-201ENST00000491725 852 ntBASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 KRT8P10-201ENST00000450021 1447 ntBASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXP3Q9BZS1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 AL353692.3-201ENST00000407031 1396 ntBASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 FAAHP1-202ENST00000446499 1238 ntBASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 IGHV3-52-201ENST00000519770 353 ntBASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXP3Q9BZS1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms