Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 RNF216P1-203ENST00000404404 2427 ntBASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC090616.6-201ENST00000582640 721 ntBASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC005336.2-201ENST00000593183 939 ntBASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 AL353593.2-201ENST00000602529 1483 ntBASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.29□□□□□ -0.28
SHANK2-AS3Q9BTD1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC063952.2-201ENST00000498792 1227 ntBASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC009336.1-201ENST00000608941 1553 ntBASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 AL135999.2-201ENST00000622438 1686 ntBASIC13.28□□□□□ -0.28
SHANK2-AS3Q9BTD1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SHANK2-AS3Q9BTD1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SHANK2-AS3Q9BTD1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
SHANK2-AS3Q9BTD1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms