Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.27■□□□□ 0.2
NR1H4Q96RI1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.27■□□□□ 0.2
NR1H4Q96RI1 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
NR1H4Q96RI1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H4Q96RI1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H4Q96RI1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H4Q96RI1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.27■□□□□ 0.2
NR1H4Q96RI1 DDX43P3-201ENST00000441064 443 ntBASIC16.27■□□□□ 0.2
NR1H4Q96RI1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.27■□□□□ 0.2
NR1H4Q96RI1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.27■□□□□ 0.2
NR1H4Q96RI1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H4Q96RI1 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NR1H4Q96RI1 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NR1H4Q96RI1 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NR1H4Q96RI1 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NR1H4Q96RI1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
NR1H4Q96RI1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NR1H4Q96RI1 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.27■□□□□ 0.19
NR1H4Q96RI1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NR1H4Q96RI1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.27■□□□□ 0.19
NR1H4Q96RI1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NR1H4Q96RI1 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
NR1H4Q96RI1 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NR1H4Q96RI1 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NR1H4Q96RI1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.27■□□□□ 0.19
NR1H4Q96RI1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NR1H4Q96RI1 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
NR1H4Q96RI1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 AC142086.2-201ENST00000569753 217 ntBASIC16.26■□□□□ 0.19
NR1H4Q96RI1 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.26■□□□□ 0.19
NR1H4Q96RI1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H4Q96RI1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 AL024508.2-201ENST00000607749 1894 ntBASIC16.25■□□□□ 0.19
NR1H4Q96RI1 MIR600HG-201ENST00000449175 5984 ntBASIC16.25■□□□□ 0.19
NR1H4Q96RI1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 POM121L13P-201ENST00000422362 380 ntBASIC16.25■□□□□ 0.19
NR1H4Q96RI1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR1H4Q96RI1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR1H4Q96RI1 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms