Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 AC073648.6-201ENST00000641589 218 ntBASIC13.1□□□□□ -0.31
AP1S3Q96PC3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
AP1S3Q96PC3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 C1QBPP2-201ENST00000528754 825 ntBASIC13.09□□□□□ -0.31
AP1S3Q96PC3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 AC006058.3-201ENST00000606217 1069 ntBASIC13.09□□□□□ -0.31
AP1S3Q96PC3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP1S3Q96PC3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
AP1S3Q96PC3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.31
AP1S3Q96PC3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
AP1S3Q96PC3 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
AP1S3Q96PC3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
AP1S3Q96PC3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms