Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC3BQ96PB8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC3BQ96PB8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 RN7SL589P-201ENST00000481268 310 ntBASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 AL512356.2-201ENST00000546955 174 ntBASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 AC051619.7-201ENST00000568314 623 ntBASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.48■□□□□ 0.39
LRRC3BQ96PB8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 KRT18P32-201ENST00000424695 1287 ntBASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC3BQ96PB8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 AC069262.1-201ENST00000539058 672 ntBASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 AP001059.3-201ENST00000619053 235 ntBASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 AL161645.1-201ENST00000622716 1255 ntBASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC3BQ96PB8 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms