Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 FLJ13224-201ENST00000313737 1514 ntBASIC19.96■□□□□ 0.79
CDCA5Q96FF9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA5Q96FF9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA5Q96FF9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 AC142381.1-201ENST00000426099 345 ntBASIC19.95■□□□□ 0.78
CDCA5Q96FF9 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 HILS1-202ENST00000545329 423 ntBASIC19.95■□□□□ 0.78
CDCA5Q96FF9 MIR3909-201ENST00000579518 119 ntBASIC19.95■□□□□ 0.78
CDCA5Q96FF9 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.95■□□□□ 0.78
CDCA5Q96FF9 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA5Q96FF9 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA5Q96FF9 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.94■□□□□ 0.78
CDCA5Q96FF9 SLC22A20-204ENST00000530038 1673 ntBASIC19.94■□□□□ 0.78
CDCA5Q96FF9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.94■□□□□ 0.78
CDCA5Q96FF9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CDCA5Q96FF9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
CDCA5Q96FF9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA5Q96FF9 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA5Q96FF9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA5Q96FF9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA5Q96FF9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA5Q96FF9 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA5Q96FF9 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.94■□□□□ 0.78
CDCA5Q96FF9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.94■□□□□ 0.78
CDCA5Q96FF9 AC010336.2-201ENST00000564226 506 ntBASIC19.94■□□□□ 0.78
CDCA5Q96FF9 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.94■□□□□ 0.78
CDCA5Q96FF9 AC007967.4-201ENST00000614700 386 ntBASIC19.94■□□□□ 0.78
CDCA5Q96FF9 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.94■□□□□ 0.78
CDCA5Q96FF9 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
CDCA5Q96FF9 AP3S2-216ENST00000617003 1561 ntBASIC19.94■□□□□ 0.78
CDCA5Q96FF9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDCA5Q96FF9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.94■□□□□ 0.78
CDCA5Q96FF9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CDCA5Q96FF9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.93■□□□□ 0.78
CDCA5Q96FF9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA5Q96FF9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CDCA5Q96FF9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA5Q96FF9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
CDCA5Q96FF9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.93■□□□□ 0.78
CDCA5Q96FF9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA5Q96FF9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDCA5Q96FF9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA5Q96FF9 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA5Q96FF9 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA5Q96FF9 AC009477.1-201ENST00000452936 217 ntBASIC19.93■□□□□ 0.78
CDCA5Q96FF9 HLA-V-204ENST00000476601 1289 ntBASIC19.93■□□□□ 0.78
CDCA5Q96FF9 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA5Q96FF9 LINC01451-201ENST00000623792 534 ntBASIC19.93■□□□□ 0.78
CDCA5Q96FF9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CDCA5Q96FF9 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA5Q96FF9 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA5Q96FF9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA5Q96FF9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA5Q96FF9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.93■□□□□ 0.78
CDCA5Q96FF9 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CDCA5Q96FF9 AC138969.3-201ENST00000546612 1459 ntBASIC19.92■□□□□ 0.78
CDCA5Q96FF9 AC138932.2-201ENST00000548268 1459 ntBASIC19.92■□□□□ 0.78
CDCA5Q96FF9 AC126755.4-201ENST00000549796 1459 ntBASIC19.92■□□□□ 0.78
CDCA5Q96FF9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA5Q96FF9 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDCA5Q96FF9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CDCA5Q96FF9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.92■□□□□ 0.78
CDCA5Q96FF9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.92■□□□□ 0.78
CDCA5Q96FF9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA5Q96FF9 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA5Q96FF9 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA5Q96FF9 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.92■□□□□ 0.78
CDCA5Q96FF9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA5Q96FF9 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.92■□□□□ 0.78
CDCA5Q96FF9 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA5Q96FF9 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA5Q96FF9 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms