Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
DDX11Q96FC9 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX11Q96FC9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.49■□□□□ 0.87
DDX11Q96FC9 MIR940-201ENST00000401276 94 ntBASIC20.49■□□□□ 0.87
DDX11Q96FC9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX11Q96FC9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.49■□□□□ 0.87
DDX11Q96FC9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.49■□□□□ 0.87
DDX11Q96FC9 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.49■□□□□ 0.87
DDX11Q96FC9 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.49■□□□□ 0.87
DDX11Q96FC9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX11Q96FC9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.49■□□□□ 0.87
DDX11Q96FC9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.49■□□□□ 0.87
DDX11Q96FC9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.49■□□□□ 0.87
DDX11Q96FC9 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.49■□□□□ 0.87
DDX11Q96FC9 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX11Q96FC9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX11Q96FC9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DDX11Q96FC9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX11Q96FC9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX11Q96FC9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX11Q96FC9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX11Q96FC9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
DDX11Q96FC9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX11Q96FC9 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.49■□□□□ 0.87
DDX11Q96FC9 AL356309.3-201ENST00000624132 1934 ntBASIC20.49■□□□□ 0.87
DDX11Q96FC9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX11Q96FC9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DDX11Q96FC9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
DDX11Q96FC9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX11Q96FC9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX11Q96FC9 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
DDX11Q96FC9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX11Q96FC9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
DDX11Q96FC9 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX11Q96FC9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX11Q96FC9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX11Q96FC9 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
DDX11Q96FC9 KRT18P13-201ENST00000400056 1290 ntBASIC20.48■□□□□ 0.87
DDX11Q96FC9 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX11Q96FC9 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX11Q96FC9 POLD2P1-201ENST00000511220 997 ntBASIC20.48■□□□□ 0.87
DDX11Q96FC9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.48■□□□□ 0.87
DDX11Q96FC9 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX11Q96FC9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX11Q96FC9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX11Q96FC9 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DDX11Q96FC9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
DDX11Q96FC9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX11Q96FC9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX11Q96FC9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX11Q96FC9 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX11Q96FC9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
DDX11Q96FC9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DDX11Q96FC9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.48■□□□□ 0.87
DDX11Q96FC9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
DDX11Q96FC9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
DDX11Q96FC9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.47■□□□□ 0.87
DDX11Q96FC9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.47■□□□□ 0.87
DDX11Q96FC9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
DDX11Q96FC9 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
DDX11Q96FC9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.47■□□□□ 0.87
DDX11Q96FC9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
DDX11Q96FC9 RPS2P1-201ENST00000434010 821 ntBASIC20.47■□□□□ 0.87
DDX11Q96FC9 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.47■□□□□ 0.87
DDX11Q96FC9 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.47■□□□□ 0.87
DDX11Q96FC9 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.47■□□□□ 0.87
DDX11Q96FC9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.47■□□□□ 0.87
DDX11Q96FC9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.47■□□□□ 0.87
DDX11Q96FC9 TERC-201ENST00000602385 541 ntBASIC20.47■□□□□ 0.87
DDX11Q96FC9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.47■□□□□ 0.87
DDX11Q96FC9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
DDX11Q96FC9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
DDX11Q96FC9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.47■□□□□ 0.87
DDX11Q96FC9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
DDX11Q96FC9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.47■□□□□ 0.87
DDX11Q96FC9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DDX11Q96FC9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms