Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 AL121672.3-201ENST00000608644 468 ntBASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB40AQ8WXH6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 BX276092.5-203ENST00000456199 560 ntBASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAB40AQ8WXH6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 LINC02012-201ENST00000608206 1725 ntBASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 AC026691.1-201ENST00000602502 2017 ntBASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.18■□□□□ 0.02
RAB40AQ8WXH6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.17■□□□□ 0.02
RAB40AQ8WXH6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms