Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 HKR1-225ENST00000592168 566 ntTSL 4 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 AC132192.2-201ENST00000596206 1147 ntBASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 AC124283.3-201ENST00000570869 594 ntBASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 BANF1P1-201ENST00000553684 263 ntBASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 AC073389.1-201ENST00000595595 795 ntBASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 CSH2-202ENST00000345366 598 ntTSL 5 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 SCARNA20.5-201ENST00000516991 142 ntBASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 PTPN20CP-201ENST00000614090 920 ntBASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 CEP164P1-201ENST00000455142 418 ntBASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 FTH1P14-201ENST00000482930 551 ntBASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 SIGLEC20P-201ENST00000595243 1311 ntBASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 RPS15-201ENST00000233609 534 ntTSL 2 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 RPS15-205ENST00000586686 562 ntTSL 5 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 RPS15-208ENST00000591804 711 ntTSL 5 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 AC087045.2-201ENST00000606279 1003 ntBASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 ZBTB12BP-201ENST00000314232 1122 ntBASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 AL645728.2-202ENST00000641679 227 ntBASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC6.84□□□□□ -1.31
SYNE2Q8WXH0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC6.84□□□□□ -1.32
SYNE2Q8WXH0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC6.84□□□□□ -1.32
SYNE2Q8WXH0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC6.84□□□□□ -1.32
SYNE2Q8WXH0 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC6.84□□□□□ -1.32
SYNE2Q8WXH0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC6.84□□□□□ -1.32
SYNE2Q8WXH0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
SYNE2Q8WXH0 AC244250.3-201ENST00000620749 366 ntBASIC6.84□□□□□ -1.32
SYNE2Q8WXH0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SYNE2Q8WXH0 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC6.83□□□□□ -1.32
SYNE2Q8WXH0 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
SYNE2Q8WXH0 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
SYNE2Q8WXH0 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
SYNE2Q8WXH0 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC6.83□□□□□ -1.32
SYNE2Q8WXH0 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SYNE2Q8WXH0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms