Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 AC064836.3-201ENST00000607928 673 ntBASIC18.51■□□□□ 0.55
BEST2Q8NFU1 LINC00896-202ENST00000609602 2128 ntBASIC18.51■□□□□ 0.55
BEST2Q8NFU1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
BEST2Q8NFU1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 AC093525.9-201ENST00000624961 1746 ntBASIC18.5■□□□□ 0.55
BEST2Q8NFU1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 BX842568.4-201ENST00000421222 227 ntBASIC18.5■□□□□ 0.55
BEST2Q8NFU1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 PAWRP1-201ENST00000451083 565 ntBASIC18.5■□□□□ 0.55
BEST2Q8NFU1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
BEST2Q8NFU1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 EGFEM1P-202ENST00000431685 1563 ntBASIC18.49■□□□□ 0.55
BEST2Q8NFU1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BEST2Q8NFU1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 AC116353.5-201ENST00000638148 1699 ntBASIC18.48■□□□□ 0.55
BEST2Q8NFU1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms