Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTL3Q8N8U3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 AP001094.4-201ENST00000579008 2176 ntBASIC17.66■□□□□ 0.42
RTL3Q8N8U3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 AC026396.1-201ENST00000419388 421 ntBASIC17.66■□□□□ 0.42
RTL3Q8N8U3 AC136632.2-201ENST00000512891 861 ntBASIC17.66■□□□□ 0.42
RTL3Q8N8U3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 AL805961.1-202ENST00000641562 540 ntBASIC17.66■□□□□ 0.42
RTL3Q8N8U3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTL3Q8N8U3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 AP002414.3-201ENST00000589352 1468 ntBASIC17.65■□□□□ 0.42
RTL3Q8N8U3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTL3Q8N8U3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.64■□□□□ 0.42
RTL3Q8N8U3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.64■□□□□ 0.42
RTL3Q8N8U3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RTL3Q8N8U3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RTL3Q8N8U3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
RTL3Q8N8U3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 PTCHD3P3-201ENST00000403073 906 ntBASIC17.64■□□□□ 0.41
RTL3Q8N8U3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 AC093909.1-201ENST00000504731 1122 ntBASIC17.64■□□□□ 0.41
RTL3Q8N8U3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 AL356488.2-201ENST00000602755 427 ntBASIC17.64■□□□□ 0.41
RTL3Q8N8U3 MIR1199-201ENST00000621445 119 ntBASIC17.64■□□□□ 0.41
RTL3Q8N8U3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.64■□□□□ 0.41
RTL3Q8N8U3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms