Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 LINC02199-201ENST00000506655 2702 ntBASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 AL138688.1-201ENST00000624851 1594 ntBASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 AL391807.1-203ENST00000604392 2365 ntBASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.25■□□□□ 0.35
EFCAB3Q8N7B9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 AC133963.1-201ENST00000504166 1679 ntBASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 AC092597.1-201ENST00000487352 616 ntBASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 AC011498.5-201ENST00000592027 486 ntBASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 AC008687.5-201ENST00000593746 558 ntBASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EFCAB3Q8N7B9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 FLJ38576-201ENST00000623820 2459 ntBASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 AP000347.1-202ENST00000435868 847 ntBASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 AL031058.1-201ENST00000561592 888 ntBASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.23■□□□□ 0.35
EFCAB3Q8N7B9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms