Protein–RNA interactions for Protein: Q8N5V2

NGEF, Ephexin-1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGEFQ8N5V2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 AL590787.1-201ENST00000568856 1315 ntBASIC22.63■■□□□ 1.21
NGEFQ8N5V2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 KRT18P13-201ENST00000400056 1290 ntBASIC22.63■■□□□ 1.21
NGEFQ8N5V2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC22.63■■□□□ 1.21
NGEFQ8N5V2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
NGEFQ8N5V2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NGEFQ8N5V2 PMS2P7-201ENST00000506558 1336 ntBASIC22.62■■□□□ 1.21
NGEFQ8N5V2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC22.62■■□□□ 1.21
NGEFQ8N5V2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NGEFQ8N5V2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NGEFQ8N5V2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC22.62■■□□□ 1.21
NGEFQ8N5V2 RNA5SP415-201ENST00000517246 115 ntBASIC22.62■■□□□ 1.21
NGEFQ8N5V2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NGEFQ8N5V2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC22.62■■□□□ 1.21
NGEFQ8N5V2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC22.62■■□□□ 1.21
NGEFQ8N5V2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC22.62■■□□□ 1.21
NGEFQ8N5V2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC22.62■■□□□ 1.21
NGEFQ8N5V2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NGEFQ8N5V2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
NGEFQ8N5V2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
NGEFQ8N5V2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
NGEFQ8N5V2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
NGEFQ8N5V2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
NGEFQ8N5V2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NGEFQ8N5V2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NGEFQ8N5V2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NGEFQ8N5V2 HCG11-201ENST00000411553 5696 ntBASIC22.61■■□□□ 1.21
NGEFQ8N5V2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NGEFQ8N5V2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
NGEFQ8N5V2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC22.61■■□□□ 1.21
NGEFQ8N5V2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
NGEFQ8N5V2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NGEFQ8N5V2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NGEFQ8N5V2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NGEFQ8N5V2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NGEFQ8N5V2 INIP-202ENST00000374236 874 ntTSL 2 BASIC22.61■■□□□ 1.21
NGEFQ8N5V2 AL139424.1-201ENST00000607572 797 ntBASIC22.61■■□□□ 1.21
NGEFQ8N5V2 AC139530.3-201ENST00000620344 690 ntBASIC22.61■■□□□ 1.21
NGEFQ8N5V2 AC117500.6-201ENST00000624871 588 ntBASIC22.61■■□□□ 1.21
NGEFQ8N5V2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC22.61■■□□□ 1.21
NGEFQ8N5V2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NGEFQ8N5V2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC22.61■■□□□ 1.21
NGEFQ8N5V2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NGEFQ8N5V2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC22.61■■□□□ 1.21
NGEFQ8N5V2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 AC060834.1-201ENST00000443027 2032 ntBASIC22.6■■□□□ 1.21
NGEFQ8N5V2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 AC008735.5-201ENST00000623544 497 ntBASIC22.6■■□□□ 1.21
NGEFQ8N5V2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 AC092053.1-201ENST00000605787 1936 ntBASIC22.6■■□□□ 1.21
NGEFQ8N5V2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NGEFQ8N5V2 TUBB8P12-201ENST00000308911 1335 ntBASIC22.59■■□□□ 1.21
NGEFQ8N5V2 TUBB7P-202ENST00000428444 1305 ntBASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms