Protein–RNA interactions for Protein: Q8N112

LSMEM2, Leucine-rich single-pass membrane protein 2, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM2Q8N112 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 UPF3AP3-201ENST00000420996 769 ntBASIC17.25■□□□□ 0.35
LSMEM2Q8N112 MED15P5-201ENST00000423150 992 ntBASIC17.25■□□□□ 0.35
LSMEM2Q8N112 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 HNRNPDP1-201ENST00000439535 754 ntBASIC17.25■□□□□ 0.35
LSMEM2Q8N112 DNAJB3-201ENST00000446806 729 ntBASIC17.25■□□□□ 0.35
LSMEM2Q8N112 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 AC112698.1-201ENST00000510299 916 ntBASIC17.25■□□□□ 0.35
LSMEM2Q8N112 PGAM5P1-201ENST00000518923 814 ntBASIC17.25■□□□□ 0.35
LSMEM2Q8N112 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 AC009154.2-201ENST00000621177 724 ntBASIC17.25■□□□□ 0.35
LSMEM2Q8N112 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 AC116353.5-201ENST00000638148 1699 ntBASIC17.25■□□□□ 0.35
LSMEM2Q8N112 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LSMEM2Q8N112 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 AC104109.2-201ENST00000602919 1418 ntBASIC17.24■□□□□ 0.35
LSMEM2Q8N112 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.24■□□□□ 0.35
LSMEM2Q8N112 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 AC098831.1-202ENST00000438821 336 ntBASIC17.24■□□□□ 0.35
LSMEM2Q8N112 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 IGHV3-22-201ENST00000520721 359 ntBASIC17.24■□□□□ 0.35
LSMEM2Q8N112 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.24■□□□□ 0.35
LSMEM2Q8N112 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 BX276092.7-203ENST00000637198 1536 ntBASIC17.23■□□□□ 0.35
LSMEM2Q8N112 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 AP001269.4-201ENST00000609611 512 ntBASIC17.23■□□□□ 0.35
LSMEM2Q8N112 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM2Q8N112 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms