Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.64■□□□□ 0.58
ZC3H3Q8IXZ2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZC3H3Q8IXZ2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ZC3H3Q8IXZ2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 UNC93B7-201ENST00000509439 705 ntBASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 AP002490.2-201ENST00000524791 560 ntBASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 AC139887.3-201ENST00000568585 713 ntBASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 IFNL4P1-201ENST00000607083 540 ntBASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 KRT8P49-201ENST00000604166 1432 ntBASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
ZC3H3Q8IXZ2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H3Q8IXZ2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 KRT18P27-201ENST00000427733 1299 ntBASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 SCARNA2-201ENST00000458748 420 ntBASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H3Q8IXZ2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H3Q8IXZ2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H3Q8IXZ2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H3Q8IXZ2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.61■□□□□ 0.57
ZC3H3Q8IXZ2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H3Q8IXZ2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ZC3H3Q8IXZ2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H3Q8IXZ2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms