Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 PRSS29P-201ENST00000440800 595 ntBASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 AC040169.1-201ENST00000565382 521 ntBASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 AC018845.2-201ENST00000568326 409 ntBASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 GPALPP1-207ENST00000611650 899 ntBASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 AC010654.1-201ENST00000615722 808 ntBASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 AC067852.2-201ENST00000590513 2313 ntBASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCN4BQ8IWT1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 OR6D1P-203ENST00000641209 4860 ntBASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 HCG4B-203ENST00000450128 991 ntBASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 AC006538.3-201ENST00000612495 578 ntBASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 NOC2LP2-201ENST00000407594 1944 ntBASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 AC068880.1-201ENST00000507289 2297 ntBASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SCN4BQ8IWT1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SCN4BQ8IWT1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SCN4BQ8IWT1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SCN4BQ8IWT1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
SCN4BQ8IWT1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
SCN4BQ8IWT1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCN4BQ8IWT1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.14■□□□□ 0.49
SCN4BQ8IWT1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SCN4BQ8IWT1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.14■□□□□ 0.49
SCN4BQ8IWT1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCN4BQ8IWT1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCN4BQ8IWT1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCN4BQ8IWT1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
SCN4BQ8IWT1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.14■□□□□ 0.49
SCN4BQ8IWT1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.14■□□□□ 0.49
SCN4BQ8IWT1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms