Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC71Q8IV32 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.2■□□□□ 0.18
CCDC71Q8IV32 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC71Q8IV32 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CCDC71Q8IV32 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC71Q8IV32 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC71Q8IV32 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CCDC71Q8IV32 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC71Q8IV32 KRT89P-201ENST00000620027 1478 ntBASIC16.2■□□□□ 0.18
CCDC71Q8IV32 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC71Q8IV32 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC71Q8IV32 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC71Q8IV32 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CCDC71Q8IV32 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC71Q8IV32 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC71Q8IV32 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC71Q8IV32 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC71Q8IV32 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC71Q8IV32 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC71Q8IV32 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 AC005915.1-201ENST00000624912 2018 ntBASIC16.19■□□□□ 0.18
CCDC71Q8IV32 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 SAPCD2P3-201ENST00000455031 850 ntBASIC16.19■□□□□ 0.18
CCDC71Q8IV32 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC71Q8IV32 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 AC116353.5-201ENST00000638148 1699 ntBASIC16.18■□□□□ 0.18
CCDC71Q8IV32 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 TSPY12P-201ENST00000421279 868 ntBASIC16.18■□□□□ 0.18
CCDC71Q8IV32 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 AF238378.1-201ENST00000526806 358 ntBASIC16.18■□□□□ 0.18
CCDC71Q8IV32 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 REXO1L6P-202ENST00000619970 1078 ntBASIC16.18■□□□□ 0.18
CCDC71Q8IV32 LINC02199-201ENST00000506655 2702 ntBASIC16.18■□□□□ 0.18
CCDC71Q8IV32 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 HLA-A-201ENST00000376802 1334 ntBASIC16.18■□□□□ 0.18
CCDC71Q8IV32 AC022898.2-201ENST00000616822 1312 ntBASIC16.18■□□□□ 0.18
CCDC71Q8IV32 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC71Q8IV32 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms