Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 AL662844.4-201ENST00000606367 2838 ntBASIC17.85■□□□□ 0.45
CCDC25Q86WR0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC25Q86WR0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 LINC01568-207ENST00000641790 1380 ntBASIC17.84■□□□□ 0.45
CCDC25Q86WR0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 MTCL1P1-201ENST00000446207 792 ntBASIC17.84■□□□□ 0.45
CCDC25Q86WR0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC25Q86WR0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CCDC25Q86WR0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.83■□□□□ 0.45
CCDC25Q86WR0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC25Q86WR0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC25Q86WR0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
CCDC25Q86WR0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
CCDC25Q86WR0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC25Q86WR0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.83■□□□□ 0.45
CCDC25Q86WR0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC25Q86WR0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC25Q86WR0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC25Q86WR0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC25Q86WR0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC25Q86WR0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC25Q86WR0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.83■□□□□ 0.44
CCDC25Q86WR0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC25Q86WR0 AC140113.3-201ENST00000605663 199 ntBASIC17.83■□□□□ 0.44
CCDC25Q86WR0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.83■□□□□ 0.44
CCDC25Q86WR0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CCDC25Q86WR0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC25Q86WR0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC25Q86WR0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms