Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PACS2Q86VP3 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC17.41■□□□□ 0.38
PACS2Q86VP3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
PACS2Q86VP3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.41■□□□□ 0.38
PACS2Q86VP3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PACS2Q86VP3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.41■□□□□ 0.38
PACS2Q86VP3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PACS2Q86VP3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PACS2Q86VP3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PACS2Q86VP3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.4■□□□□ 0.38
PACS2Q86VP3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.4■□□□□ 0.38
PACS2Q86VP3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PACS2Q86VP3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.4■□□□□ 0.38
PACS2Q86VP3 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.4■□□□□ 0.38
PACS2Q86VP3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PACS2Q86VP3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.4■□□□□ 0.38
PACS2Q86VP3 TSPY23P-201ENST00000440136 739 ntBASIC17.4■□□□□ 0.38
PACS2Q86VP3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.4■□□□□ 0.38
PACS2Q86VP3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.4■□□□□ 0.38
PACS2Q86VP3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.4■□□□□ 0.38
PACS2Q86VP3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
PACS2Q86VP3 AC005363.2-201ENST00000618631 242 ntBASIC17.4■□□□□ 0.38
PACS2Q86VP3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
PACS2Q86VP3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.4■□□□□ 0.38
PACS2Q86VP3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PACS2Q86VP3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.4■□□□□ 0.38
PACS2Q86VP3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.4■□□□□ 0.38
PACS2Q86VP3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.4■□□□□ 0.38
PACS2Q86VP3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PACS2Q86VP3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
PACS2Q86VP3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PACS2Q86VP3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PACS2Q86VP3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PACS2Q86VP3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PACS2Q86VP3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PACS2Q86VP3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.39■□□□□ 0.38
PACS2Q86VP3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.39■□□□□ 0.38
PACS2Q86VP3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PACS2Q86VP3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PACS2Q86VP3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.39■□□□□ 0.37
PACS2Q86VP3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PACS2Q86VP3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PACS2Q86VP3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PACS2Q86VP3 AC078925.2-201ENST00000624013 1973 ntBASIC17.39■□□□□ 0.37
PACS2Q86VP3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PACS2Q86VP3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PACS2Q86VP3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.39■□□□□ 0.37
PACS2Q86VP3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.39■□□□□ 0.37
PACS2Q86VP3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.39■□□□□ 0.37
PACS2Q86VP3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PACS2Q86VP3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PACS2Q86VP3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.39■□□□□ 0.37
PACS2Q86VP3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PACS2Q86VP3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PACS2Q86VP3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC17.39■□□□□ 0.37
PACS2Q86VP3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PACS2Q86VP3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PACS2Q86VP3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PACS2Q86VP3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PACS2Q86VP3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PACS2Q86VP3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PACS2Q86VP3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PACS2Q86VP3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PACS2Q86VP3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PACS2Q86VP3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.38■□□□□ 0.37
PACS2Q86VP3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PACS2Q86VP3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
PACS2Q86VP3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PACS2Q86VP3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.38■□□□□ 0.37
PACS2Q86VP3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.38■□□□□ 0.37
PACS2Q86VP3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PACS2Q86VP3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PACS2Q86VP3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PACS2Q86VP3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PACS2Q86VP3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.38■□□□□ 0.37
PACS2Q86VP3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PACS2Q86VP3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PACS2Q86VP3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms