Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 AL157888.1-201ENST00000631930 593 ntBASIC12.41□□□□□ -0.42
NFE4Q86UQ8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NFE4Q86UQ8 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 BX276092.5-203ENST00000456199 560 ntBASIC12.4□□□□□ -0.42
NFE4Q86UQ8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 AL121672.3-201ENST00000608644 468 ntBASIC12.4□□□□□ -0.42
NFE4Q86UQ8 HYMAI.1-201ENST00000620949 238 ntBASIC12.4□□□□□ -0.42
NFE4Q86UQ8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.4□□□□□ -0.42
NFE4Q86UQ8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
NFE4Q86UQ8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
NFE4Q86UQ8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
NFE4Q86UQ8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC12.4□□□□□ -0.43
NFE4Q86UQ8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.4□□□□□ -0.43
NFE4Q86UQ8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
NFE4Q86UQ8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 LINC02228-204ENST00000642115 2962 ntBASIC12.39□□□□□ -0.43
NFE4Q86UQ8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 TCAF2P1-201ENST00000291129 2421 ntBASIC12.39□□□□□ -0.43
NFE4Q86UQ8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
NFE4Q86UQ8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms