Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF546Q86UE3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF546Q86UE3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF546Q86UE3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.39□□□□□ -0.11
ZNF546Q86UE3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.39□□□□□ -0.11
ZNF546Q86UE3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF546Q86UE3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF546Q86UE3 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF546Q86UE3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF546Q86UE3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF546Q86UE3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF546Q86UE3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF546Q86UE3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
ZNF546Q86UE3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF546Q86UE3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF546Q86UE3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
ZNF546Q86UE3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF546Q86UE3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF546Q86UE3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF546Q86UE3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF546Q86UE3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 AL365209.1-201ENST00000624418 6473 ntBASIC14.38□□□□□ -0.11
ZNF546Q86UE3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 RARRES2P10-201ENST00000564312 460 ntBASIC14.38□□□□□ -0.11
ZNF546Q86UE3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 AL353708.3-201ENST00000610272 989 ntBASIC14.38□□□□□ -0.11
ZNF546Q86UE3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 AC011298.2-201ENST00000617989 482 ntBASIC14.38□□□□□ -0.11
ZNF546Q86UE3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF546Q86UE3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 AL353807.1-201ENST00000427475 662 ntBASIC14.37□□□□□ -0.11
ZNF546Q86UE3 AC026366.1-201ENST00000488803 879 ntBASIC14.37□□□□□ -0.11
ZNF546Q86UE3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 AC009065.1-201ENST00000564055 1225 ntBASIC14.37□□□□□ -0.11
ZNF546Q86UE3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 LINC01311-201ENST00000565162 1445 ntBASIC14.37□□□□□ -0.11
ZNF546Q86UE3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF546Q86UE3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms