Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.02■□□□□ -0
ATPAF1Q5TC12 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.02■□□□□ -0
ATPAF1Q5TC12 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.02■□□□□ -0
ATPAF1Q5TC12 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.02■□□□□ -0
ATPAF1Q5TC12 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATPAF1Q5TC12 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATPAF1Q5TC12 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
ATPAF1Q5TC12 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
ATPAF1Q5TC12 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATPAF1Q5TC12 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.02□□□□□ -0.01
ATPAF1Q5TC12 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
ATPAF1Q5TC12 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATPAF1Q5TC12 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ATPAF1Q5TC12 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ATPAF1Q5TC12 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
ATPAF1Q5TC12 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATPAF1Q5TC12 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ATPAF1Q5TC12 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ATPAF1Q5TC12 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.02□□□□□ -0.01
ATPAF1Q5TC12 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ATPAF1Q5TC12 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 AL353801.3-201ENST00000609898 542 ntBASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
ATPAF1Q5TC12 AC060834.1-201ENST00000443027 2032 ntBASIC15□□□□□ -0.01
ATPAF1Q5TC12 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15□□□□□ -0.01
ATPAF1Q5TC12 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15□□□□□ -0.01
ATPAF1Q5TC12 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15□□□□□ -0.01
ATPAF1Q5TC12 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATPAF1Q5TC12 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATPAF1Q5TC12 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
ATPAF1Q5TC12 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15□□□□□ -0.01
ATPAF1Q5TC12 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15□□□□□ -0.01
ATPAF1Q5TC12 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ATPAF1Q5TC12 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15□□□□□ -0.01
ATPAF1Q5TC12 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ATPAF1Q5TC12 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ATPAF1Q5TC12 MTCL1P1-201ENST00000446207 792 ntBASIC15□□□□□ -0.01
ATPAF1Q5TC12 TSSC2-201ENST00000450217 709 ntBASIC15□□□□□ -0.01
ATPAF1Q5TC12 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15□□□□□ -0.01
ATPAF1Q5TC12 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ATPAF1Q5TC12 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15□□□□□ -0.01
ATPAF1Q5TC12 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
ATPAF1Q5TC12 IGHV3-41-201ENST00000613121 348 ntBASIC15□□□□□ -0.01
ATPAF1Q5TC12 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15□□□□□ -0.01
ATPAF1Q5TC12 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
ATPAF1Q5TC12 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATPAF1Q5TC12 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ATPAF1Q5TC12 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15□□□□□ -0.01
ATPAF1Q5TC12 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ATPAF1Q5TC12 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15□□□□□ -0.01
ATPAF1Q5TC12 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATPAF1Q5TC12 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATPAF1Q5TC12 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ATPAF1Q5TC12 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15□□□□□ -0.01
ATPAF1Q5TC12 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15□□□□□ -0.01
ATPAF1Q5TC12 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ATPAF1Q5TC12 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
ATPAF1Q5TC12 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15□□□□□ -0.01
ATPAF1Q5TC12 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15□□□□□ -0.01
ATPAF1Q5TC12 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15□□□□□ -0.01
ATPAF1Q5TC12 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms