Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 AC129492.6-201ENST00000611383 1305 ntBASIC15.1■□□□□ 0.01
FREM1Q5H8C1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.1■□□□□ 0.01
FREM1Q5H8C1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 EGFEM1P-202ENST00000431685 1563 ntBASIC15.1■□□□□ 0.01
FREM1Q5H8C1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.1■□□□□ 0.01
FREM1Q5H8C1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 RHOQP3-201ENST00000437982 621 ntBASIC15.09■□□□□ 0.01
FREM1Q5H8C1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 MIR940-201ENST00000401276 94 ntBASIC15.09■□□□□ 0.01
FREM1Q5H8C1 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.09■□□□□ 0.01
FREM1Q5H8C1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.09■□□□□ 0.01
FREM1Q5H8C1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 AC080080.1-201ENST00000625121 2420 ntBASIC15.09■□□□□ 0.01
FREM1Q5H8C1 AC093525.9-201ENST00000624961 1746 ntBASIC15.09■□□□□ 0.01
FREM1Q5H8C1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FREM1Q5H8C1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
FREM1Q5H8C1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FREM1Q5H8C1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
FREM1Q5H8C1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
FREM1Q5H8C1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.08■□□□□ 0.01
FREM1Q5H8C1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
FREM1Q5H8C1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.08■□□□□ 0.01
FREM1Q5H8C1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
FREM1Q5H8C1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
FREM1Q5H8C1 VN2R19P-201ENST00000442399 1052 ntBASIC15.08■□□□□ 0.01
FREM1Q5H8C1 AC004790.2-201ENST00000623588 572 ntBASIC15.08■□□□□ 0.01
FREM1Q5H8C1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
FREM1Q5H8C1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FREM1Q5H8C1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
FREM1Q5H8C1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FREM1Q5H8C1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.08■□□□□ 0
FREM1Q5H8C1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.08■□□□□ 0
FREM1Q5H8C1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
FREM1Q5H8C1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FREM1Q5H8C1 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.08■□□□□ 0
FREM1Q5H8C1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
FREM1Q5H8C1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
FREM1Q5H8C1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.08■□□□□ 0
FREM1Q5H8C1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.08■□□□□ 0
FREM1Q5H8C1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
FREM1Q5H8C1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.08■□□□□ 0
FREM1Q5H8C1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.08■□□□□ 0
FREM1Q5H8C1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.08■□□□□ 0
FREM1Q5H8C1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
FREM1Q5H8C1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.08■□□□□ 0
FREM1Q5H8C1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.08■□□□□ 0
FREM1Q5H8C1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.08■□□□□ 0
FREM1Q5H8C1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.08■□□□□ 0
FREM1Q5H8C1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.08■□□□□ 0
FREM1Q5H8C1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
FREM1Q5H8C1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.08■□□□□ 0
FREM1Q5H8C1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.08■□□□□ 0
FREM1Q5H8C1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FREM1Q5H8C1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms