Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TNNI3KQ59H18 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 LETM1P2-201ENST00000597330 2178 ntBASIC20.97■□□□□ 0.95
TNNI3KQ59H18 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.97■□□□□ 0.95
TNNI3KQ59H18 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TNNI3KQ59H18 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.96■□□□□ 0.95
TNNI3KQ59H18 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNNI3KQ59H18 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNNI3KQ59H18 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TNNI3KQ59H18 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.96■□□□□ 0.95
TNNI3KQ59H18 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.96■□□□□ 0.95
TNNI3KQ59H18 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TNNI3KQ59H18 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.96■□□□□ 0.95
TNNI3KQ59H18 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.96■□□□□ 0.95
TNNI3KQ59H18 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TNNI3KQ59H18 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.96■□□□□ 0.95
TNNI3KQ59H18 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TNNI3KQ59H18 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.96■□□□□ 0.95
TNNI3KQ59H18 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNNI3KQ59H18 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.96■□□□□ 0.95
TNNI3KQ59H18 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TNNI3KQ59H18 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNNI3KQ59H18 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNNI3KQ59H18 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNNI3KQ59H18 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
TNNI3KQ59H18 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 AC107918.2-201ENST00000530817 355 ntBASIC20.95■□□□□ 0.94
TNNI3KQ59H18 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNNI3KQ59H18 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TNNI3KQ59H18 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TNNI3KQ59H18 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TNNI3KQ59H18 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNNI3KQ59H18 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TNNI3KQ59H18 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNNI3KQ59H18 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TNNI3KQ59H18 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNNI3KQ59H18 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNNI3KQ59H18 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNNI3KQ59H18 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.94■□□□□ 0.94
TNNI3KQ59H18 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TNNI3KQ59H18 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TNNI3KQ59H18 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNNI3KQ59H18 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.94■□□□□ 0.94
TNNI3KQ59H18 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.94■□□□□ 0.94
TNNI3KQ59H18 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
TNNI3KQ59H18 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.94■□□□□ 0.94
TNNI3KQ59H18 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.94■□□□□ 0.94
TNNI3KQ59H18 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TNNI3KQ59H18 REXO1L3P-201ENST00000622202 1288 ntBASIC20.94■□□□□ 0.94
TNNI3KQ59H18 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms