Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK3Q00526 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK3Q00526 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.91■□□□□ 0.3
CDK3Q00526 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDK3Q00526 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK3Q00526 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDK3Q00526 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDK3Q00526 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK3Q00526 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK3Q00526 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK3Q00526 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDK3Q00526 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDK3Q00526 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDK3Q00526 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK3Q00526 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK3Q00526 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDK3Q00526 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDK3Q00526 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK3Q00526 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK3Q00526 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK3Q00526 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CDK3Q00526 AC004832.2-201ENST00000426397 482 ntBASIC16.9■□□□□ 0.3
CDK3Q00526 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.9■□□□□ 0.3
CDK3Q00526 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK3Q00526 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.9■□□□□ 0.3
CDK3Q00526 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.9■□□□□ 0.3
CDK3Q00526 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK3Q00526 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK3Q00526 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.9■□□□□ 0.3
CDK3Q00526 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDK3Q00526 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
CDK3Q00526 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.9■□□□□ 0.3
CDK3Q00526 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.9■□□□□ 0.3
CDK3Q00526 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK3Q00526 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK3Q00526 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK3Q00526 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK3Q00526 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK3Q00526 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDK3Q00526 AC002310.6-201ENST00000624451 1377 ntBASIC16.89■□□□□ 0.3
CDK3Q00526 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDK3Q00526 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDK3Q00526 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK3Q00526 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK3Q00526 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK3Q00526 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDK3Q00526 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK3Q00526 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK3Q00526 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK3Q00526 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDK3Q00526 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK3Q00526 YBX2P1-201ENST00000394192 760 ntBASIC16.89■□□□□ 0.29
CDK3Q00526 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.89■□□□□ 0.29
CDK3Q00526 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.89■□□□□ 0.29
CDK3Q00526 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.89■□□□□ 0.29
CDK3Q00526 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CDK3Q00526 CXCL1P1-201ENST00000502804 216 ntBASIC16.89■□□□□ 0.29
CDK3Q00526 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK3Q00526 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.89■□□□□ 0.29
CDK3Q00526 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.89■□□□□ 0.29
CDK3Q00526 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.89■□□□□ 0.29
CDK3Q00526 PP12613-201ENST00000424958 2230 ntBASIC16.89■□□□□ 0.29
CDK3Q00526 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK3Q00526 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDK3Q00526 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.88■□□□□ 0.29
CDK3Q00526 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK3Q00526 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK3Q00526 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK3Q00526 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.88■□□□□ 0.29
CDK3Q00526 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDK3Q00526 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.88■□□□□ 0.29
CDK3Q00526 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.88■□□□□ 0.29
CDK3Q00526 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.88■□□□□ 0.29
CDK3Q00526 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.88■□□□□ 0.29
CDK3Q00526 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.88■□□□□ 0.29
CDK3Q00526 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK3Q00526 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK3Q00526 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK3Q00526 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK3Q00526 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK3Q00526 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.88■□□□□ 0.29
CDK3Q00526 RHOQP3-201ENST00000437982 621 ntBASIC16.88■□□□□ 0.29
CDK3Q00526 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.88■□□□□ 0.29
CDK3Q00526 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.88■□□□□ 0.29
CDK3Q00526 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK3Q00526 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.88■□□□□ 0.29
CDK3Q00526 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.88■□□□□ 0.29
CDK3Q00526 AC092865.6-201ENST00000642101 219 ntBASIC16.88■□□□□ 0.29
CDK3Q00526 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK3Q00526 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK3Q00526 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK3Q00526 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK3Q00526 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CDK3Q00526 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK3Q00526 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK3Q00526 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.87■□□□□ 0.29
CDK3Q00526 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDK3Q00526 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK3Q00526 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.87■□□□□ 0.29
CDK3Q00526 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms