Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NCKAP1LP55160 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NCKAP1LP55160 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.83■□□□□ 0.61
NCKAP1LP55160 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.83■□□□□ 0.61
NCKAP1LP55160 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCKAP1LP55160 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCKAP1LP55160 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCKAP1LP55160 AC145285.3-201ENST00000564603 959 ntBASIC18.83■□□□□ 0.6
NCKAP1LP55160 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.83■□□□□ 0.6
NCKAP1LP55160 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
NCKAP1LP55160 GGTLC5P-201ENST00000617623 998 ntBASIC18.83■□□□□ 0.6
NCKAP1LP55160 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NCKAP1LP55160 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCKAP1LP55160 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
NCKAP1LP55160 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NCKAP1LP55160 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NCKAP1LP55160 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NCKAP1LP55160 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.83■□□□□ 0.6
NCKAP1LP55160 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCKAP1LP55160 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.83■□□□□ 0.6
NCKAP1LP55160 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.83■□□□□ 0.6
NCKAP1LP55160 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NCKAP1LP55160 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
NCKAP1LP55160 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1LP55160 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1LP55160 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.82■□□□□ 0.6
NCKAP1LP55160 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1LP55160 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
NCKAP1LP55160 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1LP55160 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1LP55160 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1LP55160 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.82■□□□□ 0.6
NCKAP1LP55160 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1LP55160 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1LP55160 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NCKAP1LP55160 AC087163.2-201ENST00000457299 853 ntBASIC18.82■□□□□ 0.6
NCKAP1LP55160 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1LP55160 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1LP55160 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.82■□□□□ 0.6
NCKAP1LP55160 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.82■□□□□ 0.6
NCKAP1LP55160 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1LP55160 AC120114.3-201ENST00000611923 658 ntBASIC18.82■□□□□ 0.6
NCKAP1LP55160 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1LP55160 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.82■□□□□ 0.6
NCKAP1LP55160 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
NCKAP1LP55160 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
NCKAP1LP55160 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1LP55160 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1LP55160 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1LP55160 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1LP55160 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKAP1LP55160 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1LP55160 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1LP55160 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1LP55160 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1LP55160 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.81■□□□□ 0.6
NCKAP1LP55160 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1LP55160 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1LP55160 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1LP55160 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.81■□□□□ 0.6
NCKAP1LP55160 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NCKAP1LP55160 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1LP55160 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.81■□□□□ 0.6
NCKAP1LP55160 AC108751.1-201ENST00000490852 363 ntBASIC18.81■□□□□ 0.6
NCKAP1LP55160 SLC25A6P2-201ENST00000497974 877 ntBASIC18.81■□□□□ 0.6
NCKAP1LP55160 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.81■□□□□ 0.6
NCKAP1LP55160 SLC25A1P1-201ENST00000528351 927 ntBASIC18.81■□□□□ 0.6
NCKAP1LP55160 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.81■□□□□ 0.6
NCKAP1LP55160 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.81■□□□□ 0.6
NCKAP1LP55160 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.81■□□□□ 0.6
NCKAP1LP55160 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NCKAP1LP55160 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
NCKAP1LP55160 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1LP55160 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1LP55160 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1LP55160 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.81■□□□□ 0.6
NCKAP1LP55160 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1LP55160 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1LP55160 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1LP55160 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKAP1LP55160 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1LP55160 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
NCKAP1LP55160 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.8■□□□□ 0.6
NCKAP1LP55160 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1LP55160 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NCKAP1LP55160 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.8■□□□□ 0.6
NCKAP1LP55160 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1LP55160 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1LP55160 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NCKAP1LP55160 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1LP55160 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.8■□□□□ 0.6
NCKAP1LP55160 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1LP55160 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1LP55160 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.8■□□□□ 0.6
NCKAP1LP55160 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.8■□□□□ 0.6
NCKAP1LP55160 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCKAP1LP55160 RPL13AP23-201ENST00000480739 586 ntBASIC18.8■□□□□ 0.6
NCKAP1LP55160 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.8■□□□□ 0.6
NCKAP1LP55160 AC034105.1-201ENST00000563488 319 ntBASIC18.8■□□□□ 0.6
NCKAP1LP55160 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms