Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AL671883.3-201ENST00000603274 991 ntBASIC12.64□□□□□ -0.39
APOC4P55056 AC064836.3-201ENST00000607928 673 ntBASIC12.64□□□□□ -0.39
APOC4P55056 MIR3687-1-201ENST00000614492 61 ntBASIC12.64□□□□□ -0.39
APOC4P55056 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC12.64□□□□□ -0.39
APOC4P55056 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.64□□□□□ -0.39
APOC4P55056 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC4P55056 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC12.64□□□□□ -0.39
APOC4P55056 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
APOC4P55056 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
APOC4P55056 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
APOC4P55056 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC4P55056 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
APOC4P55056 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC12.63□□□□□ -0.39
APOC4P55056 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
APOC4P55056 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOC4P55056 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.63□□□□□ -0.39
APOC4P55056 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC4P55056 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC4P55056 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC4P55056 AC012317.2-201ENST00000623305 2251 ntBASIC12.63□□□□□ -0.39
APOC4P55056 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC4P55056 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
APOC4P55056 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC4P55056 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
APOC4P55056 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC4P55056 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC4P55056 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.63□□□□□ -0.39
APOC4P55056 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.63□□□□□ -0.39
APOC4P55056 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.63□□□□□ -0.39
APOC4P55056 VN2R19P-201ENST00000442399 1052 ntBASIC12.63□□□□□ -0.39
APOC4P55056 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOC4P55056 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.63□□□□□ -0.39
APOC4P55056 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.63□□□□□ -0.39
APOC4P55056 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
APOC4P55056 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC4P55056 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.63□□□□□ -0.39
APOC4P55056 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.63□□□□□ -0.39
APOC4P55056 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
APOC4P55056 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.63□□□□□ -0.39
APOC4P55056 GPALPP1-207ENST00000611650 899 ntBASIC12.63□□□□□ -0.39
APOC4P55056 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
APOC4P55056 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOC4P55056 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC12.63□□□□□ -0.39
APOC4P55056 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC12.63□□□□□ -0.39
APOC4P55056 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
APOC4P55056 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
APOC4P55056 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOC4P55056 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
APOC4P55056 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC4P55056 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
APOC4P55056 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.62□□□□□ -0.39
APOC4P55056 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC12.62□□□□□ -0.39
APOC4P55056 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
APOC4P55056 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.62□□□□□ -0.39
APOC4P55056 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.62□□□□□ -0.39
APOC4P55056 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.62□□□□□ -0.39
APOC4P55056 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC4P55056 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC4P55056 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
APOC4P55056 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
APOC4P55056 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC4P55056 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 MIR1233-2-201ENST00000408138 82 ntBASIC12.62□□□□□ -0.39
APOC4P55056 MIR1233-1-201ENST00000408722 82 ntBASIC12.62□□□□□ -0.39
APOC4P55056 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
APOC4P55056 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.62□□□□□ -0.39
APOC4P55056 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC4P55056 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC4P55056 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.62□□□□□ -0.39
APOC4P55056 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC4P55056 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.62□□□□□ -0.39
APOC4P55056 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC4P55056 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms