Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATXN3P54252 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATXN3P54252 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.67■□□□□ 0.42
ATXN3P54252 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATXN3P54252 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ATXN3P54252 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATXN3P54252 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATXN3P54252 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATXN3P54252 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATXN3P54252 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ATXN3P54252 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.66■□□□□ 0.42
ATXN3P54252 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ATXN3P54252 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATXN3P54252 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATXN3P54252 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATXN3P54252 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATXN3P54252 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATXN3P54252 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATXN3P54252 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATXN3P54252 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.66■□□□□ 0.42
ATXN3P54252 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATXN3P54252 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ATXN3P54252 AC004832.2-201ENST00000426397 482 ntBASIC17.66■□□□□ 0.42
ATXN3P54252 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.66■□□□□ 0.42
ATXN3P54252 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.66■□□□□ 0.42
ATXN3P54252 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.66■□□□□ 0.42
ATXN3P54252 NKAPP1-205ENST00000585790 367 ntBASIC17.66■□□□□ 0.42
ATXN3P54252 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATXN3P54252 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.66■□□□□ 0.42
ATXN3P54252 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.66■□□□□ 0.42
ATXN3P54252 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATXN3P54252 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.66■□□□□ 0.42
ATXN3P54252 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATXN3P54252 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATXN3P54252 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.66■□□□□ 0.42
ATXN3P54252 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATXN3P54252 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ATXN3P54252 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATXN3P54252 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ATXN3P54252 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATXN3P54252 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATXN3P54252 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.66■□□□□ 0.42
ATXN3P54252 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATXN3P54252 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATXN3P54252 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ATXN3P54252 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.65■□□□□ 0.42
ATXN3P54252 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.65■□□□□ 0.42
ATXN3P54252 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.65■□□□□ 0.42
ATXN3P54252 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ATXN3P54252 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ATXN3P54252 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ATXN3P54252 AC211486.1-202ENST00000416371 468 ntBASIC17.65■□□□□ 0.42
ATXN3P54252 LAGE3P1-201ENST00000425356 484 ntBASIC17.65■□□□□ 0.42
ATXN3P54252 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.65■□□□□ 0.42
ATXN3P54252 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.65■□□□□ 0.42
ATXN3P54252 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.65■□□□□ 0.42
ATXN3P54252 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.65■□□□□ 0.42
ATXN3P54252 AC211476.1-201ENST00000503899 468 ntBASIC17.65■□□□□ 0.42
ATXN3P54252 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.65■□□□□ 0.42
ATXN3P54252 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
ATXN3P54252 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.65■□□□□ 0.42
ATXN3P54252 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ATXN3P54252 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.65■□□□□ 0.42
ATXN3P54252 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ATXN3P54252 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ATXN3P54252 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 OR6D1P-203ENST00000641209 4860 ntBASIC17.65■□□□□ 0.42
ATXN3P54252 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ATXN3P54252 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATXN3P54252 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.65■□□□□ 0.42
ATXN3P54252 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.65■□□□□ 0.42
ATXN3P54252 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ATXN3P54252 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ATXN3P54252 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ATXN3P54252 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATXN3P54252 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATXN3P54252 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATXN3P54252 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
ATXN3P54252 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
ATXN3P54252 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms