Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.76■□□□□ 0.27
PDX1P52945 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDX1P52945 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.76■□□□□ 0.27
PDX1P52945 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PDX1P52945 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PDX1P52945 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.76■□□□□ 0.27
PDX1P52945 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PDX1P52945 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDX1P52945 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDX1P52945 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PDX1P52945 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDX1P52945 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.76■□□□□ 0.27
PDX1P52945 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PDX1P52945 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDX1P52945 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDX1P52945 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDX1P52945 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDX1P52945 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDX1P52945 NFIC-211ENST00000641145 8399 ntBASIC16.75■□□□□ 0.27
PDX1P52945 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDX1P52945 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.75■□□□□ 0.27
PDX1P52945 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDX1P52945 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDX1P52945 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDX1P52945 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
PDX1P52945 AC254562.1-201ENST00000417586 456 ntBASIC16.75■□□□□ 0.27
PDX1P52945 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDX1P52945 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PDX1P52945 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
PDX1P52945 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.75■□□□□ 0.27
PDX1P52945 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.75■□□□□ 0.27
PDX1P52945 AC010507.1-201ENST00000633895 436 ntBASIC16.75■□□□□ 0.27
PDX1P52945 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDX1P52945 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.75■□□□□ 0.27
PDX1P52945 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.75■□□□□ 0.27
PDX1P52945 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PDX1P52945 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PDX1P52945 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDX1P52945 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
PDX1P52945 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDX1P52945 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.75■□□□□ 0.27
PDX1P52945 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDX1P52945 LINC00896-202ENST00000609602 2128 ntBASIC16.75■□□□□ 0.27
PDX1P52945 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.75■□□□□ 0.27
PDX1P52945 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.74■□□□□ 0.27
PDX1P52945 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.74■□□□□ 0.27
PDX1P52945 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.74■□□□□ 0.27
PDX1P52945 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PDX1P52945 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.74■□□□□ 0.27
PDX1P52945 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.74■□□□□ 0.27
PDX1P52945 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.74■□□□□ 0.27
PDX1P52945 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.74■□□□□ 0.27
PDX1P52945 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.74■□□□□ 0.27
PDX1P52945 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.74■□□□□ 0.27
PDX1P52945 RFPL4AP1-201ENST00000530883 850 ntBASIC16.74■□□□□ 0.27
PDX1P52945 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.74■□□□□ 0.27
PDX1P52945 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.74■□□□□ 0.27
PDX1P52945 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.74■□□□□ 0.27
PDX1P52945 AC010654.1-201ENST00000615722 808 ntBASIC16.74■□□□□ 0.27
PDX1P52945 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.74■□□□□ 0.27
PDX1P52945 AC009949.1-201ENST00000623048 1830 ntBASIC16.74■□□□□ 0.27
PDX1P52945 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.74■□□□□ 0.27
PDX1P52945 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.74■□□□□ 0.27
PDX1P52945 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
PDX1P52945 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PDX1P52945 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.74■□□□□ 0.27
PDX1P52945 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PDX1P52945 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PDX1P52945 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.74■□□□□ 0.27
PDX1P52945 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDX1P52945 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.73■□□□□ 0.27
PDX1P52945 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.73■□□□□ 0.27
PDX1P52945 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDX1P52945 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.73■□□□□ 0.27
PDX1P52945 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDX1P52945 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDX1P52945 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
PDX1P52945 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms