Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.96□□□□□ -0.02
HCFC1P51610 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
HCFC1P51610 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HCFC1P51610 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
HCFC1P51610 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
HCFC1P51610 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HCFC1P51610 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HCFC1P51610 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.96□□□□□ -0.02
HCFC1P51610 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HCFC1P51610 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.95□□□□□ -0.02
HCFC1P51610 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.95□□□□□ -0.02
HCFC1P51610 MIR661-201ENST00000384842 89 ntBASIC14.95□□□□□ -0.02
HCFC1P51610 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.95□□□□□ -0.02
HCFC1P51610 FAM58DP-201ENST00000428076 619 ntBASIC14.95□□□□□ -0.02
HCFC1P51610 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.95□□□□□ -0.02
HCFC1P51610 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HCFC1P51610 AC087641.1-201ENST00000557561 1021 ntBASIC14.95□□□□□ -0.02
HCFC1P51610 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.95□□□□□ -0.02
HCFC1P51610 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.95□□□□□ -0.02
HCFC1P51610 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
HCFC1P51610 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HCFC1P51610 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCFC1P51610 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.95□□□□□ -0.02
HCFC1P51610 REXO1L9P-201ENST00000604264 2108 ntBASIC14.95□□□□□ -0.02
HCFC1P51610 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCFC1P51610 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HCFC1P51610 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
HCFC1P51610 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HCFC1P51610 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HCFC1P51610 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCFC1P51610 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.95□□□□□ -0.02
HCFC1P51610 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
HCFC1P51610 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCFC1P51610 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCFC1P51610 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCFC1P51610 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.95□□□□□ -0.02
HCFC1P51610 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.95□□□□□ -0.02
HCFC1P51610 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HCFC1P51610 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HCFC1P51610 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HCFC1P51610 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.95□□□□□ -0.02
HCFC1P51610 GPS2P2-201ENST00000430745 888 ntBASIC14.95□□□□□ -0.02
HCFC1P51610 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.95□□□□□ -0.02
HCFC1P51610 AL592309.1-201ENST00000443127 649 ntBASIC14.95□□□□□ -0.02
HCFC1P51610 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HCFC1P51610 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
HCFC1P51610 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCFC1P51610 AC026120.1-201ENST00000611536 926 ntBASIC14.95□□□□□ -0.02
HCFC1P51610 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCFC1P51610 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HCFC1P51610 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.95□□□□□ -0.02
HCFC1P51610 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCFC1P51610 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCFC1P51610 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HCFC1P51610 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
HCFC1P51610 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HCFC1P51610 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
HCFC1P51610 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.94□□□□□ -0.02
HCFC1P51610 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.94□□□□□ -0.02
HCFC1P51610 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.94□□□□□ -0.02
HCFC1P51610 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCFC1P51610 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.94□□□□□ -0.02
HCFC1P51610 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HCFC1P51610 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCFC1P51610 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCFC1P51610 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
HCFC1P51610 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.94□□□□□ -0.02
HCFC1P51610 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCFC1P51610 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCFC1P51610 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.94□□□□□ -0.02
HCFC1P51610 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.94□□□□□ -0.02
HCFC1P51610 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HCFC1P51610 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCFC1P51610 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.94□□□□□ -0.02
HCFC1P51610 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCFC1P51610 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCFC1P51610 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HCFC1P51610 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.93□□□□□ -0.02
HCFC1P51610 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.93□□□□□ -0.02
HCFC1P51610 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.93□□□□□ -0.02
HCFC1P51610 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.93□□□□□ -0.02
HCFC1P51610 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.93□□□□□ -0.02
HCFC1P51610 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.93□□□□□ -0.02
HCFC1P51610 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.93□□□□□ -0.02
HCFC1P51610 AC140878.1-201ENST00000565277 250 ntBASIC14.93□□□□□ -0.02
HCFC1P51610 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.93□□□□□ -0.02
HCFC1P51610 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HCFC1P51610 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HCFC1P51610 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
HCFC1P51610 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HCFC1P51610 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HCFC1P51610 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.93□□□□□ -0.02
HCFC1P51610 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HCFC1P51610 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HCFC1P51610 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HCFC1P51610 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HCFC1P51610 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HCFC1P51610 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HCFC1P51610 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HCFC1P51610 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms