Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1EP49674 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1EP49674 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1EP49674 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.82■□□□□ 0.28
CSNK1EP49674 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CSNK1EP49674 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1EP49674 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1EP49674 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1EP49674 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1EP49674 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.82■□□□□ 0.28
CSNK1EP49674 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.82■□□□□ 0.28
CSNK1EP49674 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.82■□□□□ 0.28
CSNK1EP49674 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.82■□□□□ 0.28
CSNK1EP49674 AC243562.1-201ENST00000560672 389 ntBASIC16.82■□□□□ 0.28
CSNK1EP49674 MIR4745-201ENST00000577608 62 ntBASIC16.82■□□□□ 0.28
CSNK1EP49674 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.82■□□□□ 0.28
CSNK1EP49674 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.82■□□□□ 0.28
CSNK1EP49674 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1EP49674 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1EP49674 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1EP49674 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CSNK1EP49674 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CSNK1EP49674 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CSNK1EP49674 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CSNK1EP49674 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CSNK1EP49674 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1EP49674 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.82■□□□□ 0.28
CSNK1EP49674 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSNK1EP49674 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CSNK1EP49674 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1EP49674 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CSNK1EP49674 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.81■□□□□ 0.28
CSNK1EP49674 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.81■□□□□ 0.28
CSNK1EP49674 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
CSNK1EP49674 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1EP49674 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1EP49674 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CSNK1EP49674 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CSNK1EP49674 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CSNK1EP49674 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CSNK1EP49674 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1EP49674 AC067863.1-201ENST00000494933 530 ntBASIC16.81■□□□□ 0.28
CSNK1EP49674 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.81■□□□□ 0.28
CSNK1EP49674 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1EP49674 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.81■□□□□ 0.28
CSNK1EP49674 DUX4L17-201ENST00000557360 1267 ntBASIC16.81■□□□□ 0.28
CSNK1EP49674 MIR4515-201ENST00000584082 81 ntBASIC16.81■□□□□ 0.28
CSNK1EP49674 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.81■□□□□ 0.28
CSNK1EP49674 AL390955.2-201ENST00000603032 514 ntBASIC16.81■□□□□ 0.28
CSNK1EP49674 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.81■□□□□ 0.28
CSNK1EP49674 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.81■□□□□ 0.28
CSNK1EP49674 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.81■□□□□ 0.28
CSNK1EP49674 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1EP49674 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1EP49674 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1EP49674 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CSNK1EP49674 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.81■□□□□ 0.28
CSNK1EP49674 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1EP49674 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1EP49674 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1EP49674 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CSNK1EP49674 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSNK1EP49674 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1EP49674 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1EP49674 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1EP49674 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1EP49674 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CSNK1EP49674 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1EP49674 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1EP49674 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.8■□□□□ 0.28
CSNK1EP49674 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CSNK1EP49674 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1EP49674 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.8■□□□□ 0.28
CSNK1EP49674 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1EP49674 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.8■□□□□ 0.28
CSNK1EP49674 KRT18P32-201ENST00000424695 1287 ntBASIC16.8■□□□□ 0.28
CSNK1EP49674 FAM58DP-201ENST00000428076 619 ntBASIC16.8■□□□□ 0.28
CSNK1EP49674 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.8■□□□□ 0.28
CSNK1EP49674 RN7SL589P-201ENST00000481268 310 ntBASIC16.8■□□□□ 0.28
CSNK1EP49674 AC093214.1-201ENST00000511688 1107 ntBASIC16.8■□□□□ 0.28
CSNK1EP49674 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.8■□□□□ 0.28
CSNK1EP49674 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.8■□□□□ 0.28
CSNK1EP49674 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.8■□□□□ 0.28
CSNK1EP49674 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.8■□□□□ 0.28
CSNK1EP49674 AL135744.1-201ENST00000565098 629 ntBASIC16.8■□□□□ 0.28
CSNK1EP49674 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.8■□□□□ 0.28
CSNK1EP49674 AC138761.1-201ENST00000584393 385 ntBASIC16.8■□□□□ 0.28
CSNK1EP49674 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.8■□□□□ 0.28
CSNK1EP49674 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.8■□□□□ 0.28
CSNK1EP49674 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CSNK1EP49674 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1EP49674 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1EP49674 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1EP49674 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1EP49674 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.8■□□□□ 0.28
CSNK1EP49674 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1EP49674 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1EP49674 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSNK1EP49674 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CSNK1EP49674 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms