Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNNI2P48788 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TNNI2P48788 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
TNNI2P48788 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNNI2P48788 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNNI2P48788 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI2P48788 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI2P48788 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI2P48788 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI2P48788 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI2P48788 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI2P48788 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI2P48788 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.41■□□□□ 0.86
TNNI2P48788 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
TNNI2P48788 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.41■□□□□ 0.86
TNNI2P48788 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.41■□□□□ 0.86
TNNI2P48788 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TNNI2P48788 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI2P48788 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI2P48788 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI2P48788 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
TNNI2P48788 AL671277.1-201ENST00000429656 993 ntBASIC20.41■□□□□ 0.86
TNNI2P48788 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.41■□□□□ 0.86
TNNI2P48788 SPDYE11-202ENST00000450699 704 ntBASIC20.41■□□□□ 0.86
TNNI2P48788 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.41■□□□□ 0.86
TNNI2P48788 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI2P48788 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.41■□□□□ 0.86
TNNI2P48788 SPDYE9P-201ENST00000570642 692 ntBASIC20.41■□□□□ 0.86
TNNI2P48788 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
TNNI2P48788 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI2P48788 SPDYE10P-202ENST00000612005 668 ntBASIC20.41■□□□□ 0.86
TNNI2P48788 SPDYE8P-202ENST00000612377 668 ntBASIC20.41■□□□□ 0.86
TNNI2P48788 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.41■□□□□ 0.86
TNNI2P48788 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.41■□□□□ 0.86
TNNI2P48788 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.41■□□□□ 0.86
TNNI2P48788 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI2P48788 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
TNNI2P48788 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI2P48788 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI2P48788 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TNNI2P48788 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI2P48788 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI2P48788 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.4■□□□□ 0.86
TNNI2P48788 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI2P48788 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI2P48788 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI2P48788 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.4■□□□□ 0.86
TNNI2P48788 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI2P48788 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI2P48788 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI2P48788 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI2P48788 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TNNI2P48788 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TNNI2P48788 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI2P48788 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI2P48788 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI2P48788 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.4■□□□□ 0.86
TNNI2P48788 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI2P48788 AL355306.1-201ENST00000415580 579 ntBASIC20.4■□□□□ 0.86
TNNI2P48788 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.4■□□□□ 0.86
TNNI2P48788 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI2P48788 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.4■□□□□ 0.86
TNNI2P48788 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.4■□□□□ 0.86
TNNI2P48788 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.4■□□□□ 0.86
TNNI2P48788 AC140658.5-201ENST00000438532 169 ntBASIC20.4■□□□□ 0.86
TNNI2P48788 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI2P48788 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.4■□□□□ 0.86
TNNI2P48788 BCRP1-201ENST00000444246 691 ntBASIC20.4■□□□□ 0.86
TNNI2P48788 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.4■□□□□ 0.86
TNNI2P48788 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI2P48788 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.4■□□□□ 0.86
TNNI2P48788 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.4■□□□□ 0.86
TNNI2P48788 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.4■□□□□ 0.86
TNNI2P48788 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.4■□□□□ 0.86
TNNI2P48788 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI2P48788 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TNNI2P48788 REXO1L11P-201ENST00000620964 1927 ntBASIC20.4■□□□□ 0.86
TNNI2P48788 LINC01451-201ENST00000623792 534 ntBASIC20.4■□□□□ 0.86
TNNI2P48788 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI2P48788 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TNNI2P48788 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI2P48788 RNF165-205ENST00000588679 2904 ntBASIC20.4■□□□□ 0.86
TNNI2P48788 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI2P48788 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNNI2P48788 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNNI2P48788 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNNI2P48788 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.39■□□□□ 0.86
TNNI2P48788 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.39■□□□□ 0.86
TNNI2P48788 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.39■□□□□ 0.86
TNNI2P48788 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNNI2P48788 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNNI2P48788 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNNI2P48788 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNNI2P48788 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNNI2P48788 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TNNI2P48788 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.39■□□□□ 0.85
TNNI2P48788 AL627223.1-201ENST00000416693 442 ntBASIC20.39■□□□□ 0.85
TNNI2P48788 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.39■□□□□ 0.85
TNNI2P48788 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TNNI2P48788 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms