Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17■□□□□ 0.31
SLC1A6P48664 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A6P48664 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SLC1A6P48664 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC1A6P48664 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A6P48664 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A6P48664 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A6P48664 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SLC1A6P48664 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
SLC1A6P48664 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
SLC1A6P48664 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC1A6P48664 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SLC1A6P48664 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A6P48664 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A6P48664 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SLC1A6P48664 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A6P48664 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SLC1A6P48664 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A6P48664 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A6P48664 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A6P48664 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC1A6P48664 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A6P48664 AL441883.1-201ENST00000566170 1045 ntBASIC16.99■□□□□ 0.31
SLC1A6P48664 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A6P48664 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC1A6P48664 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC1A6P48664 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A6P48664 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A6P48664 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC1A6P48664 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC1A6P48664 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC1A6P48664 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SLC1A6P48664 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SLC1A6P48664 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC1A6P48664 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC1A6P48664 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.98■□□□□ 0.31
SLC1A6P48664 AC092597.1-201ENST00000487352 616 ntBASIC16.98■□□□□ 0.31
SLC1A6P48664 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC1A6P48664 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.98■□□□□ 0.31
SLC1A6P48664 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC1A6P48664 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC1A6P48664 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC1A6P48664 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC1A6P48664 AL031432.5-201ENST00000641059 760 ntBASIC16.98■□□□□ 0.31
SLC1A6P48664 AP006294.2-201ENST00000641667 209 ntBASIC16.98■□□□□ 0.31
SLC1A6P48664 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC1A6P48664 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SLC1A6P48664 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SLC1A6P48664 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC1A6P48664 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC1A6P48664 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SLC1A6P48664 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC1A6P48664 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC1A6P48664 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SLC1A6P48664 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC1A6P48664 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SLC1A6P48664 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC1A6P48664 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.97■□□□□ 0.31
SLC1A6P48664 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.97■□□□□ 0.31
SLC1A6P48664 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC1A6P48664 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.97■□□□□ 0.31
SLC1A6P48664 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC1A6P48664 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms