Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2CP42773 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2CP42773 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2CP42773 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDKN2CP42773 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2CP42773 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2CP42773 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2CP42773 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2CP42773 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKN2CP42773 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKN2CP42773 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.32■□□□□ 0.2
CDKN2CP42773 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKN2CP42773 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CDKN2CP42773 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKN2CP42773 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDKN2CP42773 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2CP42773 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.32■□□□□ 0.2
CDKN2CP42773 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKN2CP42773 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CDKN2CP42773 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKN2CP42773 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKN2CP42773 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2CP42773 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.32■□□□□ 0.2
CDKN2CP42773 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.32■□□□□ 0.2
CDKN2CP42773 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2CP42773 AC009336.1-201ENST00000608941 1553 ntBASIC16.32■□□□□ 0.2
CDKN2CP42773 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2CP42773 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDKN2CP42773 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CDKN2CP42773 AC132938.5-201ENST00000624980 1813 ntBASIC16.32■□□□□ 0.2
CDKN2CP42773 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.32■□□□□ 0.2
CDKN2CP42773 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.32■□□□□ 0.2
CDKN2CP42773 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2CP42773 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDKN2CP42773 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CDKN2CP42773 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CDKN2CP42773 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.31■□□□□ 0.2
CDKN2CP42773 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDKN2CP42773 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDKN2CP42773 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
CDKN2CP42773 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.31■□□□□ 0.2
CDKN2CP42773 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.31■□□□□ 0.2
CDKN2CP42773 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.31■□□□□ 0.2
CDKN2CP42773 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.31■□□□□ 0.2
CDKN2CP42773 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.31■□□□□ 0.2
CDKN2CP42773 STK19B-204ENST00000512515 211 ntBASIC16.31■□□□□ 0.2
CDKN2CP42773 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.31■□□□□ 0.2
CDKN2CP42773 LINC01238-205ENST00000567549 1107 ntBASIC16.31■□□□□ 0.2
CDKN2CP42773 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDKN2CP42773 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.31■□□□□ 0.2
CDKN2CP42773 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.31■□□□□ 0.2
CDKN2CP42773 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDKN2CP42773 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.31■□□□□ 0.2
CDKN2CP42773 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKN2CP42773 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKN2CP42773 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKN2CP42773 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKN2CP42773 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKN2CP42773 FRMD8P1-201ENST00000440433 1524 ntBASIC16.3■□□□□ 0.2
CDKN2CP42773 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKN2CP42773 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDKN2CP42773 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKN2CP42773 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKN2CP42773 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDKN2CP42773 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKN2CP42773 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKN2CP42773 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKN2CP42773 TMPOP1-202ENST00000424642 1267 ntBASIC16.3■□□□□ 0.2
CDKN2CP42773 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKN2CP42773 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDKN2CP42773 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKN2CP42773 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.3■□□□□ 0.2
CDKN2CP42773 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CDKN2CP42773 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
CDKN2CP42773 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.3■□□□□ 0.2
CDKN2CP42773 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms