Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATP6V1AP38606 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ATP6V1AP38606 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
ATP6V1AP38606 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC21.8■■□□□ 1.08
ATP6V1AP38606 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.8■■□□□ 1.08
ATP6V1AP38606 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V1AP38606 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V1AP38606 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V1AP38606 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V1AP38606 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V1AP38606 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
ATP6V1AP38606 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V1AP38606 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V1AP38606 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.8■■□□□ 1.08
ATP6V1AP38606 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
ATP6V1AP38606 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ATP6V1AP38606 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V1AP38606 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
ATP6V1AP38606 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V1AP38606 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC21.8■■□□□ 1.08
ATP6V1AP38606 ALG1L8P-201ENST00000533887 760 ntBASIC21.8■■□□□ 1.08
ATP6V1AP38606 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC21.8■■□□□ 1.08
ATP6V1AP38606 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
ATP6V1AP38606 COX11-202ENST00000571584 1108 ntTSL 2 BASIC21.8■■□□□ 1.08
ATP6V1AP38606 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.8■■□□□ 1.08
ATP6V1AP38606 LYSMD4-203ENST00000378904 2122 ntBASIC21.8■■□□□ 1.08
ATP6V1AP38606 AC090164.3-201ENST00000610780 2143 ntBASIC21.8■■□□□ 1.08
ATP6V1AP38606 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ATP6V1AP38606 WASH6P-202ENST00000359512 1437 ntBASIC21.8■■□□□ 1.08
ATP6V1AP38606 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATP6V1AP38606 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V1AP38606 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V1AP38606 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V1AP38606 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V1AP38606 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V1AP38606 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.79■■□□□ 1.08
ATP6V1AP38606 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
ATP6V1AP38606 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V1AP38606 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V1AP38606 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V1AP38606 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC21.79■■□□□ 1.08
ATP6V1AP38606 GOLGA6L11P-201ENST00000417252 1298 ntBASIC21.79■■□□□ 1.08
ATP6V1AP38606 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATP6V1AP38606 AP005018.1-201ENST00000525475 301 ntBASIC21.79■■□□□ 1.08
ATP6V1AP38606 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.79■■□□□ 1.08
ATP6V1AP38606 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
ATP6V1AP38606 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
ATP6V1AP38606 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.79■■□□□ 1.08
ATP6V1AP38606 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6V1AP38606 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6V1AP38606 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6V1AP38606 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC21.78■■□□□ 1.08
ATP6V1AP38606 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.78■■□□□ 1.08
ATP6V1AP38606 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.78■■□□□ 1.08
ATP6V1AP38606 AC092580.3-201ENST00000430932 139 ntBASIC21.78■■□□□ 1.08
ATP6V1AP38606 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC21.78■■□□□ 1.08
ATP6V1AP38606 CECR7-204ENST00000609932 568 ntTSL 2 BASIC21.78■■□□□ 1.08
ATP6V1AP38606 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6V1AP38606 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6V1AP38606 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6V1AP38606 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.78■■□□□ 1.08
ATP6V1AP38606 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6V1AP38606 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.78■■□□□ 1.08
ATP6V1AP38606 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
ATP6V1AP38606 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
ATP6V1AP38606 AL138781.2-201ENST00000617896 1843 ntBASIC21.78■■□□□ 1.08
ATP6V1AP38606 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATP6V1AP38606 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.77■■□□□ 1.08
ATP6V1AP38606 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
ATP6V1AP38606 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATP6V1AP38606 AC098818.2-201ENST00000564925 2320 ntBASIC21.77■■□□□ 1.08
ATP6V1AP38606 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP6V1AP38606 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC21.77■■□□□ 1.08
ATP6V1AP38606 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.77■■□□□ 1.08
ATP6V1AP38606 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC21.77■■□□□ 1.08
ATP6V1AP38606 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
ATP6V1AP38606 AP000842.3-202ENST00000569238 1080 ntBASIC21.77■■□□□ 1.08
ATP6V1AP38606 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC21.77■■□□□ 1.08
ATP6V1AP38606 AC008267.7-201ENST00000624570 1194 ntBASIC21.77■■□□□ 1.08
ATP6V1AP38606 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
ATP6V1AP38606 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATP6V1AP38606 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
ATP6V1AP38606 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ATP6V1AP38606 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ATP6V1AP38606 AL353732.1-201ENST00000569618 1459 ntBASIC21.77■■□□□ 1.07
ATP6V1AP38606 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ATP6V1AP38606 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
ATP6V1AP38606 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
ATP6V1AP38606 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V1AP38606 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V1AP38606 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V1AP38606 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V1AP38606 CD81-202ENST00000381036 880 ntTSL 3 BASIC21.76■■□□□ 1.07
ATP6V1AP38606 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V1AP38606 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21.76■■□□□ 1.07
ATP6V1AP38606 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC21.76■■□□□ 1.07
ATP6V1AP38606 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.76■■□□□ 1.07
ATP6V1AP38606 LINC00304-203ENST00000565008 1864 ntBASIC21.76■■□□□ 1.07
ATP6V1AP38606 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.76■■□□□ 1.07
ATP6V1AP38606 AC027307.2-201ENST00000591252 911 ntBASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms